DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33514 and Ku80

DIOPT Version :9

Sequence 1:NP_001014558.1 Gene:CG33514 / 3346239 FlyBaseID:FBgn0053514 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_609767.2 Gene:Ku80 / 34930 FlyBaseID:FBgn0041627 Length:699 Species:Drosophila melanogaster


Alignment Length:156 Identity:33/156 - (21%)
Similarity:54/156 - (34%) Gaps:43/156 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ELQKVAKEQLKEDPERLEA--DLQAFKTWIEQQPHLNPRMDDQFLVAFLRGC--------KYSLE 65
            :..::..|.|.|:.|.:..  ::......|..||        |.:..|.|.|        ||:|.
  Fly   138 KFNEITDELLGENIELIVGTHNIAYIDNAITSQP--------QAIFNFSRKCGPDELNNQKYALS 194

  Fly    66 ---RAKSKLDKYYTLKTKYPDYFRVTNTTDSKFREIHQTGAIIYLPTPLNEN---GPRIGIWRMG 124
               |..:.|..:   |......|:|||..                |...|..   |.:|.|...|
  Fly   195 LVPRCNATLCSF---KEALHTVFKVTNRR----------------PWVWNAKLNIGSKISISLQG 240

  Fly   125 LVPVEKYTMLECMQVAQAMQEIAILE 150
            ::.::..|.::.::|.....||.|.|
  Fly   241 IIAMKNQTPVKLVKVWAEKDEIVIRE 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33514NP_001014558.1 CRAL_TRIO_N 28..74 CDD:215024 12/58 (21%)
SEC14 97..253 CDD:238099 12/57 (21%)
Ku80NP_609767.2 Ku_N 7..213 CDD:281693 17/85 (20%)
KU80 221..524 CDD:238445 12/46 (26%)
Ku_PK_bind 562..663 CDD:285938
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.