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Protein Alignment CG33514 and Ttpa

DIOPT Version :9

Sequence 1:	NP_001014558.1	Gene:	CG33514 / 3346239	FlyBaseID:	FBgn0053514	Length:	311	Species:	Drosophila melanogaster
Sequence 2:	NP_037180.1	Gene:	Ttpa / 25571	RGDID:	3915	Length:	278	Species:	Rattus norvegicus

Alignment Length:	300	Identity:	79/300 - (26%)
Similarity:	135/300 - (45%)	Gaps:	71/300 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 SPQIRPLTPELQKVAKEQ-LKEDPERLEADLQAFKTWIEQQPHLNPRMDDQFLVAFLRGCKYSLE 65
            ||.::|...||::.|:|: :.|.|                ||     :.|.||:.|||...:.|:
  Rat    21 SPLVQPGLAELRRRAQEEGVPETP----------------QP-----LTDAFLLRFLRARDFDLD 64

  Fly    66 RAKSKLDKYYTLKTKYPD-----------------YFRVTNTTDSKFREIHQTGAIIYLPTPLNE 113
            .|...:..||..:.:.|:                 |..|..:.|               ||
  Rat    65 LAWRLMKNYYKWRAECPELSADLHPRSILGLLKAGYHGVLRSRD---------------PT---- 110

  Fly   114 NGPRIGIWRMGLVPVEKYTMLECMQVAQAMQEIAILEDDYANVNGVVFIMDMKGATAAHLFQMTP 178
             |.|:.|:|:.....:.:|..:..:|:....|: |:::.....|||..|.|::|...:|.||:||
  Rat   111 -GSRVLIYRISYWDPKVFTAYDVFRVSLITSEL-IVQEVETQRNGVKAIFDLEGWQISHAFQITP 173

  Fly   179 SMAKKFTVFSEEALPLRLKAQHFINTITGFEQLFNMFKPMMSKKMQSRLFVHGN--KMGLLTEQI 241
            |:|||......::.||:::..|.||....|..:|:|.||.:::|::.|:.:|||  |..|| :..
  Rat   174 SVAKKIAAVVTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKGRIHLHGNNYKSSLL-QHF 237

  Fly   242 PLKYLPEEYGGENGTTQDIVAAMEKKLDEYADFFQENVNF 281
            | ..||.||||...:.:||       ..|:.:|..::.::
  Rat   238 P-DILPLEYGGNESSMEDI-------CQEWTNFIMKSEDY 269

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.