DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33514 and clvs1

DIOPT Version :9

Sequence 1:NP_001014558.1 Gene:CG33514 / 3346239 FlyBaseID:FBgn0053514 Length:311 Species:Drosophila melanogaster
Sequence 2:XP_012819596.1 Gene:clvs1 / 100037913 XenbaseID:XB-GENE-5740434 Length:332 Species:Xenopus tropicalis


Alignment Length:258 Identity:66/258 - (25%)
Similarity:114/258 - (44%) Gaps:27/258 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTPELQKVAKEQLKEDPERLEADLQAFKTWIEQQPHLN-PRMDDQFLVAFLRGCKYSLERAKSKL 71
            |:||..:.::.:|.|:|:.|..|:|..:..|..:|.:. .|.||.|::.|||..|::...|...|
 Frog     8 LSPETIEKSRLELNENPDTLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFNQMEAFRLL 72

  Fly    72 DKYYTLKTKYPDYFRVTNTTDSKFREIHQTGAIIYLPTPLNENGPRIG---------IW---RMG 124
            .:|:..:....|.|:.....|...:.....|    .|..| ||....|         .|   |..
 Frog    73 AQYFQYRQLNLDMFKNLKADDPGIKRALMDG----FPGVL-ENRDHYGRKILLLFAANWDQSRNS 132

  Fly   125 LVPVEKYTMLECMQVAQAMQEIAILEDDYANVNGVVFIMDMKGATAAHLFQMTPSMAKKFTVFSE 189
            .|.:.:..:|. ::|        ::||....:||.:.|:|....:.....::|||:.:......:
 Frog   133 FVDILRAILLS-LEV--------LIEDQELQINGFILIIDWSNFSFKQASKLTPSILRLAIEGLQ 188

  Fly   190 EALPLRLKAQHFINTITGFEQLFNMFKPMMSKKMQSRLFVHGNKMGLLTEQIPLKYLPEEYGG 252
            ::.|.|....||:|.......|:.:.||.:..|.:.|:|:|||.:..|.:.|....||.|:||
 Frog   189 DSFPARFGGVHFVNQPWYIHALYTIIKPFLKDKTRKRIFLHGNNLNSLHQLIHPDCLPSEFGG 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33514NP_001014558.1 CRAL_TRIO_N 28..74 CDD:215024 14/46 (30%)
SEC14 97..253 CDD:238099 41/168 (24%)
clvs1XP_012819596.1 CRAL_TRIO_N 29..75 CDD:215024 14/45 (31%)
SEC14 106..252 CDD:238099 39/156 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.