DRSC/TRiP Functional Genomics Resources

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Protein Alignment form3 and Fh5

DIOPT Version :10

Sequence 1:NP_001097527.1 Gene:form3 / 3346238 FlyBaseID:FBgn0053556 Length:1717 Species:Drosophila melanogaster
Sequence 2:NP_200276.1 Gene:Fh5 / 835554 AraportID:AT5G54650 Length:900 Species:Arabidopsis thaliana


Alignment Length:826 Identity:191/826 - (23%)
Similarity:321/826 - (38%) Gaps:181/826 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 SASPSPPPSLSSESASSATSPVSGSASTSVTPSPSPLHLQRRLTFC---GSLSRYSCAALQLVQN 202
            |.||.|||:..:.|.:|.::|||        |:......::.:...   .::|.:..|||..:..
plant   180 SRSPPPPPAKKNASKNSTSAPVS--------PAKKKEDHEKTIIIAVVVTAVSTFLLAALFFLCC 236

  Fly   203 LKKVAQSVGDIIVQLDVFVEQQECDEAQ--SLQAPD---GINLNSHLDVFYAILRQVADTPQEVP 262
            .:......|.           ::.||..  ||.:.|   |.::|      |.  ..|....|...
plant   237 SRVCGNGSGG-----------RKNDERPLLSLSSSDYSVGSSIN------YG--GSVKGDKQGHQ 282

  Fly   263 FLNILQH---LLRIDPKEPLSDIIWDTTERLVH---RATLLESHEDSVRLLRTPSSQKFACQSCR 321
            ..||..:   :...|...  ||......|||.|   |...:.:|  .:..|:.|..:..:..|.:
plant   283 SFNIYSNQGKMSSFDGSN--SDTSDSLEERLSHEGLRNNSITNH--GLPPLKPPPGRTASVLSGK 343

  Fly   322 GSDASSPTRKPSQP--VGVSAK--TTPPPP-PPPMAPAA-----PPPPPPPINGAAPPPPPPPMI 376
            ..........|..|  :.||:|  :.|||| |.|..|::     ||||.||.....|.|||||  
plant   344 SFSGKVEPLPPEPPKFLKVSSKKASAPPPPVPAPQMPSSAGPPRPPPPAPPPGSGGPKPPPPP-- 406

  Fly   377 NGGALPPPPPPPSMQMASRPRTPDPLAAEAVATAILLPQQDTPAPKAKMKTINWGKIPHNKVLGK 441
              |...|.||||   |:..|:.|.|.:..|.|.       |..|||.|:|...|.|:..|.  ..
plant   407 --GPKGPRPPPP---MSLGPKAPRPPSGPADAL-------DDDAPKTKLKPFFWDKVQANP--EH 457

  Fly   442 QNIWSIVASNHQDSPMQDIDWNE--MEGLFCLQTASAQGSPKLGRDGSQAAAGSNGCDTLDRKSK 504
            ..:|:.:.|.       ...:||  :|.||....|....:.|.|..| |||.             
plant   458 SMVWNDIRSG-------SFQFNEEMIESLFGYAAADKNKNDKKGSSG-QAAL------------- 501

  Fly   505 KESTEITLLDGKRSLNVNIFLKQFRTSNDDIIQLIRQGAHEEIGAERLRGLLKIMPEVDELDMLK 569
              ...:.:|:.|:..|::|.|:....:.:::...:|:|  .|:..|.::.|||:.|..:|...|:
plant   502 --PQFVQILEPKKGQNLSILLRALNATTEEVCDALREG--NELPVEFIQTLLKMAPTPEEELKLR 562

  Fly   570 GFNGDKARLGNAEKFLLQLLEVPNYKLRIESMLLKEEFAANVAYLEPCINSMLYAGDDLLNNKTL 634
            .:.|:.|:||:||:||..::::|....|:|::|........:|:::.....:..|..:|..::..
plant   563 LYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTLHEEMAFVKESFQKLEVACKELRGSRLF 627

  Fly   635 QEVLYMVVVAGNFLNSGGYAGNAAGVKLSSLQKLTDIRANKPGMNLIHFVA-------------- 685
            .::|..|:..||.:|.|.:.|.|...||.:|.||.|::.......|:|||.              
plant   628 LKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRTEGVRAART 692

  Fly   686 --------------LQAEK---------RNPELLQFTGQLSNLESASKTTSEQINNEINTLDGRI 727
                          |..|:         ||..|.:.:|..|.||...|:.    |.:.:.|.|.:
plant   693 IRESQSFSSVKTEDLLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSA----NIDADGLTGTV 753

  Fly   728 RRIAR-----------QIEQPATDVDIKEQMADFLQAAESELSVLQAGMKQVESMRLKMSEFFCD 781
            .::..           :::....:...:|.:.||:|.||..:..:....|::.::.....::|..
plant   754 LKMGHALSKARDFVNSEMKSSGEESGFREALEDFIQNAEGSIMSILEEEKRIMALVKSTGDYFHG 818

  Fly   782 DAATFRLEECFKIFHNFCDKFKQAVKENERRQQQEQQATLRRKQREEQLARRARQIGQAGTPVSD 846
            .|........|.|..:|.....::.|  |.|:.:.:...:.|||               |:..|.
plant   819 KAGKDEGLRLFVIVRDFLIILDKSCK--EVREARGRPVRMARKQ---------------GSTASA 866

  Fly   847 SEHSFLGDAIFDPRAS--PALSRRHLGSGEISNGFIRLEQDGASPD 890
            |..:.......|||..  ||::.|            |::|..:..|
plant   867 SSETPRQTPSLDPRQKLFPAITER------------RVDQSSSDSD 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
form3NP_001097527.1 Drf_FH3 48..309 CDD:461885 39/181 (22%)
FH2 415..803 CDD:396655 96/437 (22%)
PTZ00449 <1145..1465 CDD:185628
Fh5NP_200276.1 FH2 435..840 CDD:396655 96/435 (22%)
Blue background indicates that the domain is not in the aligned region.

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