DRSC/TRiP Functional Genomics Resources

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Protein Alignment form3 and fmn2a

DIOPT Version :10

Sequence 1:NP_001097527.1 Gene:form3 / 3346238 FlyBaseID:FBgn0053556 Length:1717 Species:Drosophila melanogaster
Sequence 2:XP_001333061.5 Gene:fmn2a / 793321 ZFINID:ZDB-GENE-101107-1 Length:1465 Species:Danio rerio


Alignment Length:813 Identity:189/813 - (23%)
Similarity:308/813 - (37%) Gaps:195/813 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 RLLEAGNVESSASPSPPPSLSSESASSATSPVSGSASTSVTPSP----------SPLHLQRRLTF 185
            |:|:.|.::..:.....||..|:                ||..|          :|:. |..:..
Zfish   719 RILDLGILQPFSDCIREPSTGSD----------------VTDKPTFNKDQLYTWAPMG-QHDIRT 766

  Fly   186 CGSLSRYSCAALQLVQNLKKVAQSVGDIIVQLDVFVEQQECDEAQSLQAPDGINLNSHL------ 244
            .|.|.|.....|...|: ....|| |.::....|.:::.|....:.|:....|..::|:      
Zfish   767 PGRLQRIWPPTLTAAQD-GSTGQS-GSVLEGSSVSIQELEQTIEELLEKISEIEKDNHVVDGKLG 829

  Fly   245 --DVFYAILRQVADTPQ-----EVPFLNILQHL--LRIDPKE-------PLSDIIWDTTERLVHR 293
              |      |:||...|     :|....:|.|:  ::..|.|       |||.  ...|.:|...
Zfish   830 RKD------REVAGFNQTIKQTKVNGQRVLHHVKAIQTSPVEEAFKFPVPLSH--QSQTPKLSDS 886

  Fly   294 ATLLESHEDSVRLLRTPSSQKFACQSCRGSDA---SSPT------------RKPSQPVG------ 337
            ||             :|....:.| ||:.:.:   |:|.            ..|.:|.|      
Zfish   887 AT-------------SPMGLPYTC-SCQRTTSQPLSTPPPPQLPPPPPLSGMTPPKPTGVIPPPP 937

  Fly   338 ----------VSAKTTPP-------PPPPPMAPAAPPPPPPPINGAAPPPPPPPMINGGALPPP- 384
                      |..|..||       |||||..|...||||||..|..|||||||   .|..||| 
Zfish   938 PLPGFVPPPPVVGKAPPPPPLPGMVPPPPPPLPGMAPPPPPPFPGMTPPPPPPP---PGCGPPPP 999

  Fly   385 -------PPPPSMQMASRPRTPDPLAAEAVATAILLPQQDTPAPKAKMKTINWGKIP-HNKVLGK 441
                   ||||.|.|.     |..:|.|:|      |.:....|...||.:.|.:|. |.|...|
Zfish  1000 PLPPGIGPPPPFMGMG-----PPGMAHESV------PLKAVIEPPRPMKPLYWTRIQLHAKKDAK 1053

  Fly   442 QNIWSIVASNHQDSPMQDIDWNEMEGLFCLQTASAQGSPKLGRDGSQAAAGSNGCDTLDRKSKKE 506
            .   ::|..|.|:   ..:|::|...:|.......:..|.              .||:.:...|:
Zfish  1054 S---ALVWENVQE---PSVDFDEFVEMFAKSAVKEKKKPI--------------SDTITKSKAKQ 1098

  Fly   507 STEITLLDGKRSLNVNIFLKQFRTSNDDIIQLIRQGAHEEIGAERLRGLLKIMPEVDELDMLKGF 571
              .:.||..|||..|.|.:........||...|.:.....:..|.|:.|.:...:.:|:|.::..
Zfish  1099 --VVKLLSNKRSQAVGILMSSLHLDMKDIQNAILKMDCTVVDLETLQALYENRAQKEEMDQIEKH 1161

  Fly   572 ---NGDKAR---LGNAEKFLLQLLEVPNYKLRIESMLLKEEFAANVAYLEPCINSMLYAGDDLLN 630
               :.||.:   |...|:|||||.|||.:..|:..:|.:..|...|..::..:.::......|.:
Zfish  1162 VKSSKDKEKPKPLDKPEQFLLQLSEVPQFSERVFCILFQSTFTECVTSVQRKLETLGRVCTALQS 1226

  Fly   631 NKTLQEVLYMVVVAGNFLNSGGYA-GNAAGVKLSSLQKLTDIRANKPGMNLIHFVALQ-----AE 689
            .:.:.::|.:|:..||.:|.|..: |.|.|..|..|.||.|::::....:|:.::...     .|
Zfish  1227 GQAVLQILGLVLAFGNIMNGGNRSRGQADGFSLDILPKLKDVKSSDNSQSLLSYIVAYYLRHFDE 1291

  Fly   690 KRNPELLQF-TGQLSNLESASKTTSEQINNEINTLDGRIRRIARQIE-----------QPATDVD 742
            ....|...: ..:..:|..||:...|....::..|...:...:.:.|           ||     
Zfish  1292 DAGKETCTYPLPEPQDLFQASQMKFEDFQRDLRKLRKDLNACSAEREKVCNISSDEHLQP----- 1351

  Fly   743 IKEQMADFLQAAESELSVLQAGMKQVESMRLKMSEFFCDDAATFRLE----ECFKIFHNFCDKFK 803
            .|::|.|||..|::||.:.:..:...:.:.|::|.||.........|    ..|.::|.|...||
Zfish  1352 FKDKMDDFLTKAKTELELQEKQLTDTQRIFLELSVFFSVKPKAGEKEVSPNTFFTVWHEFSSDFK 1416

  Fly   804 QAVKENERRQQQEQQATLRRKQREEQLARRARQ 836
            :..|...:...||      |.:..|:..::||:
Zfish  1417 ELWKRENKSLLQE------RLKAAEETFKQARE 1443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
form3NP_001097527.1 Drf_FH3 48..309 CDD:461885 41/209 (20%)
FH2 415..803 CDD:396655 91/416 (22%)
PTZ00449 <1145..1465 CDD:185628
fmn2aXP_001333061.5 None
Blue background indicates that the domain is not in the aligned region.

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