DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment form3 and inf2

DIOPT Version :10

Sequence 1:NP_001097527.1 Gene:form3 / 3346238 FlyBaseID:FBgn0053556 Length:1717 Species:Drosophila melanogaster
Sequence 2:XP_021322927.1 Gene:inf2 / 792715 ZFINID:ZDB-GENE-140711-5 Length:238 Species:Danio rerio


Alignment Length:131 Identity:62/131 - (47%)
Similarity:87/131 - (66%) Gaps:5/131 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSRIGLDYIVENRDYIAKLGAALDTQNATVKKQVFELLSALCAYSPDGYARAIETLEFYKNLKK 65
            |:|..|:.:||:|..|:.||..||||.|..|||||||||:||..:|.:|:..|::.||.||.:|.
Zfish   113 MNSSAGIHFIVDNEGYVRKLSQALDTSNTMVKKQVFELLAALSMFSSEGHRLALDALEHYKCVKT 177

  Fly    66 QRYRFKIVINELELSSAAAHPPLDYQAALLAFINCVIISAATLQERIRIRNEFIGLKVLPLLNNL 130
            |:|||.:::|||..:.     .:.|...||:.||.:|.||..||:|.::|.|||||::|.||..|
Zfish   178 QQYRFSVIMNELRSTD-----NVPYMVTLLSVINALIFSADGLQQRDKMRKEFIGLQLLQLLPKL 237

  Fly   131 R 131
            |
Zfish   238 R 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
form3NP_001097527.1 Drf_FH3 48..309 CDD:461885 36/84 (43%)
FH2 415..803 CDD:396655
PTZ00449 <1145..1465 CDD:185628
inf2XP_021322927.1 Drf_GBD <98..154 CDD:461886 23/40 (58%)
Drf_FH3 160..>226 CDD:461885 27/70 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.