DRSC/TRiP Functional Genomics Resources

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Protein Alignment form3 and fmn2b

DIOPT Version :10

Sequence 1:NP_001097527.1 Gene:form3 / 3346238 FlyBaseID:FBgn0053556 Length:1717 Species:Drosophila melanogaster
Sequence 2:XP_009305265.2 Gene:fmn2b / 566432 ZFINID:ZDB-GENE-080225-35 Length:1461 Species:Danio rerio


Alignment Length:794 Identity:191/794 - (24%)
Similarity:289/794 - (36%) Gaps:218/794 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 CAALQLVQNLKKVAQSVGDI-----IVQLDVFVEQQECDEAQSLQAPDGINLNSHLDVFYAILRQ 253
            |...||.|.::.:...:.::     :.:.:|..:.|||...:.|          |.||.:..| |
Zfish   738 CVIEQLEQTIEDLRSKIAELEKQQPLPEREVETQDQECGGEEGL----------HPDVCHVDL-Q 791

  Fly   254 VADTPQEVPFLNILQHLLRIDPKEPLSDIIWDTTERL------VHRATLLESHEDSVRLLRTPSS 312
            ..:|           .||.::.|...:..: |.:.|.      |.|.:||.|..:|     ..:|
Zfish   792 TENT-----------SLLPLEAKSVQTSPV-DESYRFKVPPVEVRRDSLLASQTES-----QAAS 839

  Fly   313 QKFACQSCRGSDASSPTRKPSQPVGVSAKTTPP-------PPPPPMAPAAPPPPPPPINGAAPPP 370
            |.|.|...:.:..|:|...|..| ||.|...||       |.|||:....|||||||:.|....|
Zfish   840 QSFVCICQQQTSTSAPPPPPPLP-GVCAPPPPPPLPGVCVPTPPPLPGVCPPPPPPPLPGVCAIP 903

  Fly   371 PPPPMINGGALPP----------------------PPPPPSMQMASRPRTPDPLAAEAVATAILL 413
            |||| :.|.:|||                      |||||.:...|.|..|.||....|.....|
Zfish   904 PPPP-LPGASLPPPPPPLPCLSVPPPPPPLPGMGAPPPPPPLPGLSAPPPPPPLPGMGVPPPPPL 967

  Fly   414 PQQDT-PA-----------------------------------------------------PKAK 424
            |...| ||                                                     |...
Zfish   968 PLTHTGPAPPPPPPPIPPSMAPGACAPPLAFGFGSLPPPLPLGLFALGAVQEKPPRKCIVEPPRP 1032

  Fly   425 MKTINWGKIP-HNKVLGKQNIWSIVASNHQDSPMQDIDWNEMEGLFCLQTASAQGSPKLGRDGSQ 488
            ||.:.|.:|. |.|......:|..:     :.|  .:|::|...||. :||..:....|.     
Zfish  1033 MKPLYWTRIQLHTKKDSNAVVWDTI-----EEP--SVDFDEFVDLFS-KTAVKEKKKPLS----- 1084

  Fly   489 AAAGSNGCDTLDRKSKKESTEITLLDGKRSLNVNIFLKQFRTSNDDIIQLIRQGAHEEIGAERLR 553
                    ||:.|...|:  .:.||:.|||..|.|.:........||...|....:..:..|.|:
Zfish  1085 --------DTISRSKTKQ--VVKLLNTKRSQAVGILMSSLHLDMKDIQHAILNLDNTVVDLETLQ 1139

  Fly   554 GLLKIMPEVDELDML-------KGFNGDKARLGNAEKFLLQLLEVPNYKLRIESMLLKEEFAANV 611
            .|.:...:.||||.:       |...|.|. |...|:||.||.::||:..|:..:|.:..|:   
Zfish  1140 ALYENRAQQDELDKIEKHIKSSKDKEGTKP-LDKPEQFLHQLSQIPNFSGRVFCILFQSTFS--- 1200

  Fly   612 AYLEPCINSM-------------LYAGDDLLNNKTLQEVLYMVVVAGNFLNSGGYA-GNAAGVKL 662
                .||.|:             |.:|..:|      :||.:|:..|||:|.|... |.|.|..|
Zfish  1201 ----ECITSVQRKLQILQKVCKTLQSGSGVL------QVLGLVLAFGNFMNGGNRTRGQADGFTL 1255

  Fly   663 SSLQKLTDIRANKPGMNLIHFVALQ-----AEKRNPELLQF-TGQLSNLESASKTTSEQINNEIN 721
            ..|.||.|::::....:|:.::...     .|....|...| ..:..:|..||:...|....::.
Zfish  1256 DILPKLKDVKSSDNSKSLLAYIVSYYLRHFDEDAGRETCVFPLPEPHDLFQASQMKFEDFTKDLL 1320

  Fly   722 TLDGRIRRIARQIE-----------QPATDVDIKEQMADFLQAAESELSVLQAGMKQVESMRLKM 775
            .|...:|....::|           ||     .||:|..|:..|::||...:..:.....:.|.:
Zfish  1321 RLRKDLRACTAEVEKVCSVSTEEHLQP-----FKEKMEAFVTEAKTELEGQEKQLSDTHKLFLDL 1380

  Fly   776 SEFFCDDAATFRLE----ECFKIFHNFCDKFKQAVKENERRQQQEQQATLRRKQREEQLARRARQ 836
            ..||...|.:...|    ..|.::|.||..||...|:..:...||     |.|..||..    ||
Zfish  1381 CVFFSVKAKSGEKEVSPNTFFSVWHEFCTDFKDTWKKENKLILQE-----RLKAAEECF----RQ 1436

  Fly   837 IGQAGTPVSDSEHS 850
            :.:..|.....:|:
Zfish  1437 VKEKATYSVKPKHA 1450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
form3NP_001097527.1 Drf_FH3 48..309 CDD:461885 26/125 (21%)
FH2 415..803 CDD:396655 105/484 (22%)
PTZ00449 <1145..1465 CDD:185628
fmn2bXP_009305265.2 None
Blue background indicates that the domain is not in the aligned region.

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