DRSC/TRiP Functional Genomics Resources

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Protein Alignment form3 and fmnl1

DIOPT Version :10

Sequence 1:NP_001097527.1 Gene:form3 / 3346238 FlyBaseID:FBgn0053556 Length:1717 Species:Drosophila melanogaster
Sequence 2:NP_001007523.1 Gene:fmnl1 / 493573 XenbaseID:XB-GENE-1003193 Length:1167 Species:Xenopus tropicalis


Alignment Length:991 Identity:213/991 - (21%)
Similarity:388/991 - (39%) Gaps:163/991 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSRIGLDYIVENRDYIAKLGAALDTQNATVKKQVFELLSALCAYSPDGYARAIETLEFYKNLKK 65
            |:.:.|...::.:...:.|:..:|..:|...|..|.|||:|:|... .|:...:....::..:..
 Frog   240 MNYQSGFSMVMSHSSCVNKITLSLSNKNPRTKALVLELLAAVCLVR-GGHELILSAFNYFMEMCG 303

  Fly    66 QRYRFKIVINELELSSAAAHPPLDYQAALLAFINCVIISAATLQERIRIRNEFIGLKVLPLLNNL 130
            :..||:.::.......:    .:|:..|.:.|||.|:.|...:..|:.::.||   .:|.|...|
 Frog   304 EGARFEKLMEYFRTEDS----NIDFMVACMQFINIVVHSVKNMNFRVFLQYEF---TLLGLDEYL 361

  Fly   131 RLLEAGNVESSASPSPPPSLSSESASSATSPVSGSASTSVTPSPSPLH---LQRRLTFCGSLSRY 192
            .:|:  |.||...     .:..::.......|:.....:.|.:....|   ||..||      |.
 Frog   362 EILK--NTESERL-----QVQIQAYLDNIFDVNSLLEDTDTKNEMLEHVEDLQEHLT------RV 413

  Fly   193 SCAALQLVQNLKKVAQSVGDIIVQLD-VFVEQQECDEAQSLQAPD-------------------- 236
            : ..|||.:|  :..:.|.::..||| ...|.....|...:|||.                    
 Frog   414 T-EKLQLTEN--EYVRRVAELEKQLDQCRREMSSAKEKLVVQAPQVTQNIVQRTELVKRSVLWVE 475

  Fly   237 --GINLNSHL--DVFYAILRQVADTPQEVPFLNILQHLLRIDPKEPLSDIIWD--TTERLVHRAT 295
              |......:  :.|.:.|...|.||   |.......:..|.|....:|.:..  .:.|......
 Frog   476 PAGDTCTEEISDNTFTSDLPSAASTP---PLSPSAIRITLISPSVTSTDALSSRGNSPRSTTPPA 537

  Fly   296 LLESHEDSVRLLRTPS--------------------------------SQKFACQSCRGSDASSP 328
            ||.|..:|..:...|:                                :|....||...:...||
 Frog   538 LLPSLPESSEIFSIPAPSPVPSSEDSSDTALKASKVNPVPSPPSIIDQTQTSNAQSLSRTHDESP 602

  Fly   329 TRKPSQPVGVSAKTTPPPPPPPMAPAAPPPPP-PPINGAAPP----------PPPPPMINGGALP 382
            ...|..|: .|....|||||.||:...||||| |.::|..||          |||||.:....:|
 Frog   603 PPPPPPPL-PSIAEIPPPPPLPMSADVPPPPPLPELSGIPPPPPLPMGEQGAPPPPPSMGAPGVP 666

  Fly   383 PPPPPPSMQMASRPRTP---DPLAAEAVATAILLPQQDTPAPKAKMKTINWGKIPHNKVLGKQNI 444
            ||||||.......|..|   .|.|......:|..|.|    .|.:|:.:||..:...::.|    
 Frog   667 PPPPPPPSGFGPAPPPPPGGQPAATLNTGVSIKKPIQ----TKLRMQVLNWVALKPTQING---- 723

  Fly   445 WSIVASNHQDSPMQDIDWNEMEGLFCLQTASAQGSPKLGRDGSQAAAGSNGCDTLDRKSKKESTE 509
             ::....:.:..:|::|.::.|..|   ...||| |.......:..|..|           :..:
 Frog   724 -TVFTHLNDEKVLQELDMSDFEENF---KTKAQG-PSQTTFSMKVKAAQN-----------QPNK 772

  Fly   510 ITLLDGKRSLNVNIFLKQFRTSNDDIIQLIRQGAHEEIGAERLRGLLKIMPEVDELDMLKGFNGD 574
            ::|::..|:.|:.|.|::...|.:.|...|::...:....:.|..|.:.:|...|...:..:..|
 Frog   773 VSLIETNRAKNLAITLRKGGLSPEAITSAIQKYDMQAFNMDFLELLARFLPTDWERQQISRYCRD 837

  Fly   575 KARLGN---AEKFLLQLLEVPNYKLRIESMLLKEEFAANVAYLEPCINSMLYAGDDLLNNKTLQE 636
            :..|.:   .::|::.|..:|....|:.:|.....|....:.|:|.:::::.|...:.::..|:.
 Frog   838 QKPLDDLTAEDRFMVHLCSIPRLAERVNTMTFMANFPDMASRLKPQLDALIAASMSIKSSDKLKG 902

  Fly   637 VLYMVVVAGNFLNSGGYAGNAAGVKLSSLQKLTDIRANKPGMNLIHFVALQAEKRNPELLQFTGQ 701
            :|.:|:..||::|| ...|.|.|.:|.||..|.:.::......|:|::.....::...|..|...
 Frog   903 ILELVLAFGNYMNS-SKRGAAYGFRLQSLDVLLETKSTDRKQTLLHYMIRVICEKYSHLSNFYCD 966

  Fly   702 LSNLESASKTTSEQINNEINTLDGRIRRIARQIEQPATDVDIKEQMADFLQAAESELSVLQAGMK 766
            |:.::.|:..:.:.:..::.:|...:    .|:::..|..|....:.||:::....|..|.|..|
 Frog   967 LNFMDKAATVSLDSVLADVKSLQAGM----EQVQKEFTKQDDCLILKDFIKSNMDSLKQLSADAK 1027

  Fly   767 QVESMRLKMSEFFCDDAATFRLEECFKIFHNFCDKFKQAVKENERRQQQE---QQA---TLRRKQ 825
            ..:........:|.::|.|......|.||..|...:|||.::.|..::||   |:|   |..::.
 Frog  1028 TAQEAYDAAVGYFGENAKTTPPSTFFPIFVRFIKAYKQAEQDLETWKKQESAVQEAKPETAGKQA 1092

  Fly   826 REEQLARRAR-QIG---------QAGTPVSDSEHSFLGDAIFDPRASPALSRRHLG--SGEISNG 878
            .:..:.:..| |:.         |...|....::..:.|.|.|.|..| ..|..:|  ||:    
 Frog  1093 PQSPVVKSLRPQVNLMAELNKKLQTKEPRVYEQNWAIEDIITDLRNQP-YRRTDVGRRSGK---- 1152

  Fly   879 FIRLEQDGASPDITPN 894
                :|:...|..||:
 Frog  1153 ----KQNSGQPLNTPD 1164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
form3NP_001097527.1 Drf_FH3 48..309 CDD:461885 56/290 (19%)
FH2 415..803 CDD:396655 76/390 (19%)
PTZ00449 <1145..1465 CDD:185628
fmnl1NP_001007523.1 Drf_GBD 37..283 CDD:461886 11/42 (26%)
Drf_FH3 286..>423 CDD:461885 32/159 (20%)
FH2 698..1064 CDD:396655 78/394 (20%)
Blue background indicates that the domain is not in the aligned region.

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