DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment form3 and AT5G07740

DIOPT Version :10

Sequence 1:NP_001097527.1 Gene:form3 / 3346238 FlyBaseID:FBgn0053556 Length:1717 Species:Drosophila melanogaster
Sequence 2:NP_001331227.1 Gene:AT5G07740 / 3770686 AraportID:AT5G07740 Length:1683 Species:Arabidopsis thaliana


Alignment Length:581 Identity:156/581 - (26%)
Similarity:262/581 - (45%) Gaps:97/581 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 PSQPVGVSAKTTPPPPPPPMAPAAPPPPPPPINGAAPPPPPPPMINGGALPPPPPPPSMQMASRP 396
            |..|:...|   ||||||||...||||||||:.|.||||||||...|...|||||||..:....|
plant  1135 PPPPMRGGA---PPPPPPPMHGGAPPPPPPPMRGGAPPPPPPPGGRGPGAPPPPPPPGGRAPGPP 1196

  Fly   397 RTPDP------------LAAEAVATAILLPQ-----QDTPAP--------KAKMKTINWGKIPHN 436
            ..|.|            |.|...|..   |:     :..|.|        |:.:|.::|.|:  .
plant  1197 PPPGPRPPGGGPPPPPMLGARGAAVD---PRGAGRGRGLPRPGFGSAAQKKSSLKPLHWVKV--T 1256

  Fly   437 KVLGKQNIWSIVASNHQDSPMQDIDWNEMEGLFCLQTASAQGSPKLGRDGSQAAAGSNGCDTLDR 501
            :.| :.::|..:..:.:.....:.|.:|:|.||     ||.......:.||:            |
plant  1257 RAL-QGSLWDELQRHGESQTPSEFDVSEIETLF-----SATVQKPADKSGSR------------R 1303

  Fly   502 KSKKESTE-ITLLDGKRSLNVNIFLKQFRTSNDDIIQLIRQGAHEEIGAERLRGLLKIMPEVDEL 565
            ||.....| :.|:|.:|:.|..|.|.:.:....|::..:.......:..:::..|:|..|..:|:
plant  1304 KSVGAKPEKVQLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQIENLIKFCPTKEEM 1368

  Fly   566 DMLKGFNGDKARLGNAEKFLLQLLEVPNYKLRIESMLLKEEFAANV--AYLEP------------ 616
            ::||.:.|||..||..|::.|:|::||..:.::.....|.:|...|  .||.|            
plant  1369 ELLKNYTGDKTTLGKCEQYFLELMKVPRVEAKLRVFSFKFQFGTQVWWNYLIPLFSVYLILWRTK 1433

  Fly   617 --------------------CINSMLYAGDDLLNNKTLQEVLYMVVVAGNFLNSGGYAGNAAGVK 661
                                .:|::..|.:::.:::.|:|::..::..||.||.|...|.|.|.|
plant  1434 YNFIRLLIMMFFVQITEFKKSLNAVNSACEEVRSSQKLKEIMKKILYLGNTLNQGTARGAAVGFK 1498

  Fly   662 LSSLQKLTDIRANKPGMNLIHFVALQAEKRNPELLQFTGQLSNLESASKTTSEQINNEINTLDGR 726
            |.||.||:|.||....|.|:|::......:...||.|...|.:||||||...:.:..|:..:...
plant  1499 LDSLSKLSDTRAANSKMTLMHYLCKVLASKASVLLDFPKDLESLESASKIQLKSLAEEMQAIIKG 1563

  Fly   727 IRRI-----ARQIEQPATDVDIKEQMADFLQAAESELSVLQAGMKQVESMRLKMSEFFCDDAATF 786
            :.::     |.:.:.|.:|| .::.:.||:..||:|::.:.:....|......::.:|.:|....
plant  1564 LEKLNQELTASESDGPVSDV-FRKTLGDFISVAETEVATVSSLYSVVGRNADALAHYFGEDPNRC 1627

  Fly   787 RLEECFKIFHNFCDKFKQAVKENERRQQQEQQATLRRKQREEQLARRARQIGQAGTPVSDS 847
            ..|:......||...||:|.:||.::.:.|::..|:..:.|     :|:.:.....||.||
plant  1628 PFEQVTATLLNFIRLFKKAHEENVKQAELEKKKALKEAEME-----KAKGVNLTKKPVDDS 1683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
form3NP_001097527.1 Drf_FH3 48..309 CDD:461885
FH2 415..803 CDD:396655 100/440 (23%)
PTZ00449 <1145..1465 CDD:185628
AT5G07740NP_001331227.1 PTP_DSP_cys 16..190 CDD:475123
PTEN_C2 198..337 CDD:463081
MSCRAMM_ClfA <343..667 CDD:468110
FH2 1237..1644 CDD:396655 98/427 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.