DRSC/TRiP Functional Genomics Resources

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Protein Alignment form3 and Fmn1

DIOPT Version :10

Sequence 1:NP_001097527.1 Gene:form3 / 3346238 FlyBaseID:FBgn0053556 Length:1717 Species:Drosophila melanogaster
Sequence 2:XP_038962394.1 Gene:Fmn1 / 296512 RGDID:1306349 Length:1429 Species:Rattus norvegicus


Alignment Length:876 Identity:198/876 - (22%)
Similarity:322/876 - (36%) Gaps:233/876 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 ASPSPPPSLSSESASSAT------------SPVSGSAST-----SVTPSPSPLHLQRRLTFCGSL 189
            ||| |.|.|..|.....:            ||......|     :|.|.|.....:.::....:.
  Rat   659 ASP-PCPFLLHEDKEKTSRSELYLDLNPDQSPTEQDDRTPGRLQAVWPPPKTKDTEEKVGLKYTE 722

  Fly   190 SRYSCAALQL-------VQNLK-------------------KVAQSVGDIIVQLDVFVEQQECDE 228
            :.|..|.|.|       ::||:                   ::.:::.::..||:  ..:.||:|
  Rat   723 AEYQAAILHLKREHKEEIENLQAQFELKTFHIRGEHALVTARLEETIDNLKQQLE--KRRGECEE 785

  Fly   229 AQSLQAPDGINLNSHLDVFYAILRQVADTPQEVPFLNILQHLLRIDPKEPLSDIIWDTTERLVHR 293
            .:.      :.:::..|.|....|.|........||....    ::.|...|..|  ..::|...
  Rat   786 MRD------VCVSTDDDCFPKAFRNVCIQTDRETFLKPCD----VESKTTRSSQI--VPKKLTIS 838

  Fly   294 ATLLESHEDSVRL---LRT----PSS--QKFACQSCRGSDASSPTRKPSQPVGVSAKTTPPPPP- 348
            .|.|...:||...   |:|    |||  ||.       |..:.||..|..|:       ||||| 
  Rat   839 LTQLSPSKDSKDFHAPLQTRECIPSSSQQKI-------SPPAPPTPPPPPPI-------PPPPPL 889

  Fly   349 ----------PPMAPAA--------PPPPPPPI---NGAAPPPPPPPMIN-------GGALPPPP 385
                      ||::|.:        |||||||:   .|..|||||||:.|       ||..||||
  Rat   890 PPGLGPLPPAPPISPVSAGSPLPPPPPPPPPPLPPSAGPPPPPPPPPLPNVQTPPNSGGPPPPPP 954

  Fly   386 PPPSMQMASRPRTPDPLAAEAVATAILLPQQDTPAPKAKMKTINWGKIPHNKVL--GKQNIWSIV 448
            |||...:|  |..|..|:....:::...|::....|...||.:.|.:|..|...  ....:|..:
  Rat   955 PPPPPGLA--PPPPPGLSFGLSSSSSQCPRKPAIEPSCPMKPLYWTRIQINDKSQDATPTLWDSL 1017

  Fly   449 ASNHQDSPMQDIDWNEMEGLFCLQTASAQGSPKLGRDGSQAAAGSNGCDTLDRKSKKESTEITLL 513
            ...|      .:|.:|.|.||...|...:..|.              .:..::|:|.:.. |.||
  Rat  1018 EEPH------IMDTSEFEYLFSKDTTQQKKKPL--------------SEAYEKKNKVKKI-IKLL 1061

  Fly   514 DGKRSLNVNIFLKQFRTSNDDIIQLIRQGAHEEIGAERLRGLLKIMPEVDELDMLKGF-----NG 573
            |||||..|.|.:........||.|.|.......:..|.|..|.:...:.|||..::.:     ..
  Rat  1062 DGKRSQTVGILISSLHLEMKDIQQAIFNVDDSVVDLETLAALYENRAQEDELTKIRKYYETSREE 1126

  Fly   574 DKARLGNAEKFLLQLLEVPNYKLRIESMLLKEEFAANVAYLEPCINSMLYAGDDLLNNKTLQEVL 638
            |...|...|:||.:|.::||:..|.:.::.:..|:..:..|...:..:..|...||:.|:::::|
  Rat  1127 DLKLLDKPEQFLHELAQIPNFAERAQCIIFRAVFSEGITSLHRKVEIVTRASKGLLHMKSVKDIL 1191

  Fly   639 YMVVVAGNFLNSGGYA-GNAAGVKLSSLQKLTDIRANKPGMNLIHFVALQAEKRNPELLQFTGQL 702
            .:::..||::|.|... |.|.|..|..|.||.|:::...||||:.:|.       ...|::..|.
  Rat  1192 ALILAFGNYMNGGNRTRGQADGYSLEILPKLKDVKSRDNGMNLVDYVV-------KYYLRYYDQE 1249

  Fly   703 SNLES-------------ASKTTSEQINNEINTLDGRIRRIARQIEQPATDVDI--KEQMADFLQ 752
            :..:.             ||:...|.:..:       :|::.||:|.....:.:  ||...::||
  Rat  1250 AGTDKSVFPLPEPQDFFLASQVKFEDLIKD-------LRKLKRQLEASEQQMRLVCKESPREYLQ 1307

  Fly   753 AAESELSVLQAGMKQVESMRLKMSEFFCDDAATFRLEECFKIFHNFCDKFKQAVKENERRQQQEQ 817
            ..:.                 |:.||                       ||:|.||::..:...:
  Rat  1308 PFKD-----------------KLEEF-----------------------FKKAKKEHKMEESHLE 1332

  Fly   818 QATLRRKQREEQLARRARQIGQAGTPVSDSEHSFLGDAIFD-------------PRASPALSRRH 869
            .|   :|..|       ..:|..|......|.......:|.             .|.|..:|:..
  Rat  1333 NA---QKSFE-------TTVGYFGMKPKTGEKEVTPSYVFMVWFEFCSDFKTIWKRESKNISKER 1387

  Fly   870 LGSGEISNGFIRLEQDGASPDITPNGSLRRR 900
            |...|.|...:..|:...:..|.|..||:.|
  Rat  1388 LKMAEASVSKLTSEKKVETKKINPTASLKER 1418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
form3NP_001097527.1 Drf_FH3 48..309 CDD:461885 39/212 (18%)
FH2 415..803 CDD:396655 86/410 (21%)
PTZ00449 <1145..1465 CDD:185628
Fmn1XP_038962394.1 FH2 983..1380 CDD:214697 99/481 (21%)
Blue background indicates that the domain is not in the aligned region.

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