DRSC/TRiP Functional Genomics Resources

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Protein Alignment nab and mab-10

DIOPT Version :9

Sequence 1:NP_001014557.3 Gene:nab / 3346237 FlyBaseID:FBgn0259986 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_496268.2 Gene:mab-10 / 187916 WormBaseID:WBGene00003107 Length:582 Species:Caenorhabditis elegans


Alignment Length:606 Identity:187/606 - (30%)
Similarity:257/606 - (42%) Gaps:178/606 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEASSNPTTPTTAVATTTSTSSPSPAASTSSKGHSQSATASASASATQSQLLTTSLEMPKTEDLY 65
            |.:||:.:.||::.:||||:.:..|:||    .|.:|..:|:|:|.:....||       |:...
 Worm     1 MSSSSSSSLPTSSASTTTSSITSRPSAS----HHLESILSSSSSSPSILSSLT-------TQSTS 54

  Fly    66 NLSVASGLSEGQRSLSGAP-SASSSPIMSPQGKIFGRNANGTMITTSRPGNEAEVQLYRVLQRAS 129
            ::..:|..|..::|.|.|. ..|..|:.:|              ||.     :|.||..||.:|:
 Worm    55 SIPTSSSSSSQRQSTSNADRPVSPKPMPTP--------------TTL-----SEWQLLAVLSKAN 100

  Fly   130 LLAYYDTLLEMGGDDVQQLYDAGEEEFLEIMALVGMASKPLHVRRLQKALHEWANNPGLFQGPMM 194
            |:.|||..:..||||:.|:....|.||||||.||||..|||||||:|:||.|::.:...|....:
 Worm   101 LVQYYDVFIAQGGDDINQIMACEEREFLEIMNLVGMLPKPLHVRRMQRALAEYSQDQTAFNLAAL 165

  Fly   195 PHLGLCETPPKPALIFNP---------------DTTPALPRQKF--------------------- 223
            ..:|     |.|.|.:.|               .|:|..|..:|                     
 Worm   166 QQIG-----PPPPLNYTPAGTDPMALLLPGIAAATSPKFPSLRFLSQLSSVAEKVSTPSEAADTS 225

  Fly   224 ---PSFN---------------------------------------PSGSSFMPSP-VPPAPLPA 245
               ||.|                                       ||.||....| :|...|||
 Worm   226 SSSPSLNLNTTSSNSVPLAFKFSTPLLESLASDQQSSSTSSVRSVLPSTSSNTSHPELPAGILPA 290

  Fly   246 -----SASVPAPTVPLATQI--------SCPSAPSVPLPLVLPPNPLTSSPHPSANSNLPANTAH 297
                 ||:||.|:......:        :...|.||...||:||:. ||...||.:....::...
 Worm   291 TTTNVSAAVPPPSSRATANVFSGNSIGLNFSGAASVTRHLVVPPSS-TSIQQPSTSFGRSSSITG 354

  Fly   298 Q--VSSSSPQL---------------------------TPVLTEAQIQRITMCADKIGRQLPQRE 333
            |  ..||||.|                           .|.|:.|||.|:..||....:.||...
 Worm   355 QEKEGSSSPFLGVGYSQPYGNDFVSLGDFDPNNPSLTENPTLSTAQISRLAECALAASKNLPPLP 419

  Fly   334 PRAQTTRKRTTRELEQVIAMGEQDPRRMDEIRKYSAIYGRFDCKRRPEKPLTLHEVCVNEAAAQL 398
            ||....:||.::|:.:::......|..:...|||||||||||.||:|.|.|||||..||||||||
 Worm   420 PRLVQNKKRVSKEVIELLKCSPATPSMIHAFRKYSAIYGRFDTKRKPHKVLTLHETTVNEAAAQL 484

  Fly   399 CRNPQTIWLLTRRDELFPLARQIVKDAGFGHSASIARYGGLLTQLPSQGAGL-----GGGRAPGD 458
            |....:  ||||||||||||||||||||:.::.|..|        |...|.|     ..|.:|..
 Worm   485 CLLVPS--LLTRRDELFPLARQIVKDAGYNYAKSRKR--------PCDPADLHSPISSPGNSPPP 539

  Fly   459 TDCE-----SSDAAVPSKRQR 474
            .:.|     ||.:....:.:|
 Worm   540 QESEFDEQPSSSSGAFKEEER 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nabNP_001014557.3 NCD1 113..190 CDD:282724 37/76 (49%)
NCD2 301..435 CDD:282725 71/160 (44%)
mab-10NP_496268.2 NCD1 84..161 CDD:282724 40/95 (42%)
NCD2 379..519 CDD:282725 66/141 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167572
Domainoid 1 1.000 122 1.000 Domainoid score I3503
eggNOG 1 0.900 - - E1_KOG3835
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 167 1.000 Inparanoid score I2788
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28922
OrthoDB 1 1.010 - - D1002244at2759
OrthoFinder 1 1.000 - - FOG0002990
OrthoInspector 1 1.000 - - oto20380
orthoMCL 1 0.900 - - OOG6_108292
Panther 1 1.100 - - LDO PTHR12623
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3887
SonicParanoid 1 1.000 - - X1985
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.890

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