DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nab and Nab1

DIOPT Version :10

Sequence 1:NP_001014557.3 Gene:nab / 3346237 FlyBaseID:FBgn0259986 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_032693.2 Gene:Nab1 / 17936 MGIID:107564 Length:486 Species:Mus musculus


Alignment Length:493 Identity:153/493 - (31%)
Similarity:223/493 - (45%) Gaps:132/493 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 ITTSRPGNEAEVQLYRVLQRASLLAYYDTLLEMGGDDVQQLYDAGEEEFLEIMALVGMASKPLHV 172
            :.|:.|....|:||||:||:|:||:|:|..::.||||||||.:||||||||||||||||||||||
Mouse     1 MATALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHV 65

  Fly   173 RRLQKALHEWANNPGLFQGPMMPHLGLCETPPKPALIFNPDTTPALPRQKFPSFNP-----SGSS 232
            |||||||.:|..|||||..|      |...|           ..::|..|.|..:|     |.:|
Mouse    66 RRLQKALRDWVTNPGLFNQP------LTSLP-----------VSSIPIYKLPEGSPTWLGISCNS 113

  Fly   233 FMPSPVPPAPLPASASVPAPTVPLATQISCPSA-------------PSVPLPLVLPPNPLTSSPH 284
            :..|        :|:..|...:|.....:|..:             .||....:...:..|.|.|
Mouse   114 YERS--------SSSREPHLKIPKCAATTCVQSLGQGKSEVGSLALQSVSDSRLWQGHHATESEH 170

  Fly   285 PSANSNLPANTAHQVSSSSPQLTPVLTEAQIQRITMCADKIGRQLPQRE----PRAQTTRKRTTR 345
            ..:.::|.:..:.:.||.:......|:.|:      |.:::...||:.:    .......|:..:
Mouse   171 SLSPADLGSPASPKESSEALDAAAALSVAE------CVERMAPTLPKSDLSEVKELLKNNKKLAK 229

  Fly   346 ELEQVIAMGEQDPRRMDEIRKYSAIYGRFDCKRRPEKPLTLHEVCVNEAAAQLCRNPQTIWLLTR 410
            .:..:..|.::||.:.:|||||||||||||.||:..|.|||||:.|||||||||.....  ||||
Mouse   230 MIGHIFEMSDEDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNA--LLTR 292

  Fly   411 RDELFPLARQIVKDAGFGHSASIAR-------------------YGGLLTQLPS----------Q 446
            |||||.||||:.::..:.::....|                   :......:|:          :
Mouse   293 RDELFALARQVSREVTYKYTYRTTRLKCGERDELSPKRIKIEDGFPDFQESVPTLFQQARAKSEE 357

  Fly   447 GAGLGGGRA----------------------------------PGDTDCESSDAAVPSKRQRLSS 477
            .||||..:|                                  .|:   :|.|..:||.    ||
Mouse   358 LAGLGSQQAEKGMAKQMELLCAQAGYERLQQERRLTAGLYRQSSGE---QSPDGGLPSD----SS 415

  Fly   478 TEAAQLPLDLNREAVEDSRYNLFA-------MYQKFAK 508
            ....:.||:|...:|::.:.:.|.       :|...||
Mouse   416 DGQGERPLNLRIPSVQNRQPHHFVVDGELSRLYSSEAK 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nabNP_001014557.3 NCD1 113..190 CDD:461473 55/76 (72%)
NCD2 309..435 CDD:461474 52/129 (40%)
Nab1NP_032693.2 NCD1 4..82 54/77 (70%)
NCD1 5..83 CDD:461473 55/77 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..187 4/26 (15%)
NCD2 189..317 CDD:461474 52/135 (39%)
NCD2 220..309 47/90 (52%)
Necessary for nuclear localization. /evidence=ECO:0000250 306..337 1/30 (3%)
Nab1 321..485 CDD:461472 21/140 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..438 11/46 (24%)

Return to query results.
Submit another query.