DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf6 and AT1G14650

DIOPT Version :9

Sequence 1:NP_001014589.1 Gene:scaf6 / 3346235 FlyBaseID:FBgn0261872 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_001117289.1 Gene:AT1G14650 / 838027 AraportID:AT1G14650 Length:785 Species:Arabidopsis thaliana


Alignment Length:853 Identity:169/853 - (19%)
Similarity:266/853 - (31%) Gaps:327/853 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VQPPRDASLRNIIDKLAEFVARNGPEFEAITKQKQQNNPKFEFLYGGE-FANYYQFRVAAEQALL 66
            :.||.|  :|.|::|.|:||::||.|||.......:.|.||.||...: :..:||.::...:|..
plant    62 IHPPPD--IRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQN 124

  Fly    67 KQQA---------INQQLPPGAPSGHYMQHPPPMQQSQ-----PPGLYPPPNQQPPHPPE----- 112
            |..|         .:.||..||..........|..|:|     .|...|.|.:.....||     
plant   125 KDGAQGTDDSDGTTDPQLDTGAADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPEGITGE 189

  Fly   113 -------TAQDNMQQQTQHSWPPNSGNG---GPPNNQQANGNP----------MAMNLTSQLEA- 156
                   |||          :...:|..   |..|.:  |.||          |....||.::| 
plant   190 ELDIIKLTAQ----------FVARNGKSFLTGLSNRE--NNNPQFHFMKPTHSMFTFFTSLVDAY 242

  Fly   157 --IKMQQKSLREQIQQSEANLSAQHTALMNQKTKQIEDAIAAAQTAQQEQMAGEQGIVLRDFDGV 219
              :.|..|.|:|::::|.|:|    |.::.:...::|     ...:|::|...|:          
plant   243 SEVLMPPKDLKEKLRKSAADL----TTVLERCLHRLE-----WDRSQEQQKKKEE---------- 288

  Fly   220 LQPIIESCTKDSISAGKNWILQHSTDSAKINVVLQYLLKKALVNGSTFQQKLHLIYLVNDILHHC 284
                                     |..::..|     :.|:::...|                 
plant   289 -------------------------DEKELERV-----QMAMIDWHDF----------------- 306

  Fly   285 MRKNINDLKNSLENVVIPMFCSADLIGNPDQRQKLAKLLSLWE----SKAKFFDACVISKLQSPD 345
                          ||:.....||     ::.::|...::|.|    |||...:.   .::..|.
plant   307 --------------VVVESIDFAD-----EEDEELPPPMTLDEVIRRSKASAMEE---DEIVEPG 349

  Fly   346 SSMQ--------------------EYKTNLQNTH-HDITAKFTQNTKATLDNYQKQH---HVFIQ 386
            ..::                    |....::|.| .:...:..:|.|...|....:.   .|.|.
plant   350 KEVEMEMDEEEVKLVAEGMRAANLEENVKIENVHDEEAPMRIVKNWKRPEDRIPTERDPTKVVIS 414

  Fly   387 HASQQIVQLEKQAQHLEQQIVAQKSQQQH-----------MLQHQQ--KNIPSLMSHRIAMPGDH 438
            ..:.:::.:.:.::|:...::..|.::|.           :.|..:  |||..|...|..:.|..
plant   415 PITGELIPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTT 479

  Fly   439 EHMNS-------QGPHDQQHPQA--------------------------GNNMY----------- 459
            |...|       :...|:|..|.                          |:.:|           
plant   480 EEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGDPNSFPGPAA 544

  Fly   460 -----PGGNFQQQQPPPGNHFADPRGPNFFIPDMSKPPPG--FPG-----------PMHHNQGPA 506
                 ||....:..|||         ||..: ::.:|||.  :||           |||..    
plant   545 LPPPRPGVPIVRPLPPP---------PNLAL-NLPRPPPSAQYPGAPRPLGVPMMQPMHQQ---- 595

  Fly   507 MGQQQPQPGQFPPMQAPGSGNEPPVDLGVLSAAIQACLQMQQ-QHHPDDPQQQGQHQLQ------ 564
              .|...||  ||.......|.||              |||. .|.|..|..|..|.:|      
plant   596 --HQLTMPG--PPGHPQMMMNRPP--------------QMQPGMHVPPPPGSQFAHHMQIPRPYG 642

  Fly   565 ---------QQQQQQPQQQKQPPPMAAYPQNIVRPGQQNADSSEVDLDVL------------NAA 608
                     .|....|.....|||..|.|.   .|.:..|...:.|...|            .|.
plant   643 QLPPSAMGMMQPPPMPGMAPPPPPEEAPPP---LPEEPEAKRQKFDESALVPEDQFLAQHPGPAT 704

  Fly   609 IRAVITNKPEDGTLEDGQQPQKLVDGESGEPV------VIGEPQIPTAPYYDL--PAGLMVPLIR 665
            ||   .:||.:   .|||..:..|...| |.|      :.||.||| |....|  .||.:...:.
plant   705 IR---VSKPNE---NDGQFMEITVQSLS-ENVGSLKEKIAGEIQIP-ANKQKLSGKAGFLKDNMS 761

  Fly   666 LEDYNYKA 673
            |..||..|
plant   762 LAHYNVGA 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaf6NP_001014589.1 Surp 13..61 CDD:280053 17/48 (35%)
CTD_bind 271..329 CDD:282648 7/61 (11%)
G-patch 885..933 CDD:279867
AT1G14650NP_001117289.1 SWAP 69..121 CDD:197818 18/51 (35%)
SWAP 191..244 CDD:197818 13/64 (20%)
PRP21_like_P 262..470 CDD:403444 37/295 (13%)
PAT1 <540..>643 CDD:401645 32/134 (24%)
Ubl_SF3a120 702..778 CDD:340498 25/76 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0007
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1256232at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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