DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scaf6 and AT1G14650

DIOPT Version :10

Sequence 1:NP_001014589.1 Gene:scaf6 / 3346235 FlyBaseID:FBgn0261872 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_172917.1 Gene:AT1G14650 / 838027 AraportID:AT1G14650 Length:785 Species:Arabidopsis thaliana


Alignment Length:853 Identity:169/853 - (19%)
Similarity:266/853 - (31%) Gaps:327/853 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VQPPRDASLRNIIDKLAEFVARNGPEFEAITKQKQQNNPKFEFLYGGE-FANYYQFRVAAEQALL 66
            :.||.|  :|.|::|.|:||::||.|||.......:.|.||.||...: :..:||.::...:|..
plant    62 IHPPPD--IRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQN 124

  Fly    67 KQQA---------INQQLPPGAPSGHYMQHPPPMQQSQ-----PPGLYPPPNQQPPHPPE----- 112
            |..|         .:.||..||..........|..|:|     .|...|.|.:.....||     
plant   125 KDGAQGTDDSDGTTDPQLDTGAADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPEGITGE 189

  Fly   113 -------TAQDNMQQQTQHSWPPNSGNG---GPPNNQQANGNP----------MAMNLTSQLEA- 156
                   |||          :...:|..   |..|.:  |.||          |....||.::| 
plant   190 ELDIIKLTAQ----------FVARNGKSFLTGLSNRE--NNNPQFHFMKPTHSMFTFFTSLVDAY 242

  Fly   157 --IKMQQKSLREQIQQSEANLSAQHTALMNQKTKQIEDAIAAAQTAQQEQMAGEQGIVLRDFDGV 219
              :.|..|.|:|::::|.|:|    |.::.:...::|     ...:|::|...|:          
plant   243 SEVLMPPKDLKEKLRKSAADL----TTVLERCLHRLE-----WDRSQEQQKKKEE---------- 288

  Fly   220 LQPIIESCTKDSISAGKNWILQHSTDSAKINVVLQYLLKKALVNGSTFQQKLHLIYLVNDILHHC 284
                                     |..::..|     :.|:::...|                 
plant   289 -------------------------DEKELERV-----QMAMIDWHDF----------------- 306

  Fly   285 MRKNINDLKNSLENVVIPMFCSADLIGNPDQRQKLAKLLSLWE----SKAKFFDACVISKLQSPD 345
                          ||:.....||     ::.::|...::|.|    |||...:.   .::..|.
plant   307 --------------VVVESIDFAD-----EEDEELPPPMTLDEVIRRSKASAMEE---DEIVEPG 349

  Fly   346 SSMQ--------------------EYKTNLQNTH-HDITAKFTQNTKATLDNYQKQH---HVFIQ 386
            ..::                    |....::|.| .:...:..:|.|...|....:.   .|.|.
plant   350 KEVEMEMDEEEVKLVAEGMRAANLEENVKIENVHDEEAPMRIVKNWKRPEDRIPTERDPTKVVIS 414

  Fly   387 HASQQIVQLEKQAQHLEQQIVAQKSQQQH-----------MLQHQQ--KNIPSLMSHRIAMPGDH 438
            ..:.:::.:.:.::|:...::..|.::|.           :.|..:  |||..|...|..:.|..
plant   415 PITGELIPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTT 479

  Fly   439 EHMNS-------QGPHDQQHPQA--------------------------GNNMY----------- 459
            |...|       :...|:|..|.                          |:.:|           
plant   480 EEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGDPNSFPGPAA 544

  Fly   460 -----PGGNFQQQQPPPGNHFADPRGPNFFIPDMSKPPPG--FPG-----------PMHHNQGPA 506
                 ||....:..|||         ||..: ::.:|||.  :||           |||..    
plant   545 LPPPRPGVPIVRPLPPP---------PNLAL-NLPRPPPSAQYPGAPRPLGVPMMQPMHQQ---- 595

  Fly   507 MGQQQPQPGQFPPMQAPGSGNEPPVDLGVLSAAIQACLQMQQ-QHHPDDPQQQGQHQLQ------ 564
              .|...||  ||.......|.||              |||. .|.|..|..|..|.:|      
plant   596 --HQLTMPG--PPGHPQMMMNRPP--------------QMQPGMHVPPPPGSQFAHHMQIPRPYG 642

  Fly   565 ---------QQQQQQPQQQKQPPPMAAYPQNIVRPGQQNADSSEVDLDVL------------NAA 608
                     .|....|.....|||..|.|.   .|.:..|...:.|...|            .|.
plant   643 QLPPSAMGMMQPPPMPGMAPPPPPEEAPPP---LPEEPEAKRQKFDESALVPEDQFLAQHPGPAT 704

  Fly   609 IRAVITNKPEDGTLEDGQQPQKLVDGESGEPV------VIGEPQIPTAPYYDL--PAGLMVPLIR 665
            ||   .:||.:   .|||..:..|...| |.|      :.||.||| |....|  .||.:...:.
plant   705 IR---VSKPNE---NDGQFMEITVQSLS-ENVGSLKEKIAGEIQIP-ANKQKLSGKAGFLKDNMS 761

  Fly   666 LEDYNYKA 673
            |..||..|
plant   762 LAHYNVGA 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaf6NP_001014589.1 SWAP 12..63 CDD:197818 18/51 (35%)
CID 219..338 CDD:461442 14/122 (11%)
G-patch 885..933 CDD:396249
AT1G14650NP_172917.1 SWAP 69..121 CDD:197818 18/51 (35%)
SWAP 191..244 CDD:197818 13/64 (20%)
PRP21_like_P 262..470 CDD:403444 37/295 (13%)
SOBP <535..646 CDD:464609 32/142 (23%)
Ubl_SF3a120 702..778 CDD:340498 25/76 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.