DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment scaf6 and AT1G14640

DIOPT Version :9

Sequence 1:	NP_001014589.1	Gene:	scaf6 / 3346235	FlyBaseID:	FBgn0261872	Length:	960	Species:	Drosophila melanogaster
Sequence 2:	NP_001319004.1	Gene:	AT1G14640 / 838026	AraportID:	AT1G14640	Length:	735	Species:	Arabidopsis thaliana

Alignment Length:	775	Identity:	152/775 - (19%)
Similarity:	270/775 - (34%)	Gaps:	234/775 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 VQPPRDASLRNIIDKLAEFVARNGPEFEAITKQKQQNNPKFEFLYG-GEFANYYQFRVAAEQALL 66
            :.||.:  :|.|::..|:||::||..|....|.::.||..|.||.. ..:..:|:::|......:
plant    61 IYPPPE--IRKIVETTAQFVSQNGLAFGNKVKTEKANNANFSFLKSDNPYHGFYRYKVTEYSCHI 123

  Fly    67 KQQAINQQLPPGAPSGHYMQHP---------PPMQ-QSQPPGLY---PPPNQQPPHPPETAQDNM 118
            :..|....:..       .:.|         |.:| |.:.|...   |.|.:.....||...:..
plant   124 RDGAQGTDVDD-------TEDPKLDDESDAKPDLQAQFRAPRKILEAPEPEKYTVRLPEGIMEAE 181

  Fly   119 QQQTQHSWPPNSGNG---------GPPNNQQAN----GNPMAMNLTSQLEA---IKMQQKSLREQ 167
            ....:|:....:.||         ...||.|..    .:.|....||.::|   :.|..:.|:|:
plant   182 LDIIKHTAQFVARNGQSFLRELMRREVNNSQFQFMKPTHSMFTFFTSLVDAYSEVLMPPRDLKEK 246

  Fly   168 IQQSEANLSAQHTALMNQKTKQIE-DAIAAAQTAQQEQMAGEQGIVL-----RDFDGVLQPIIES 226
            :::|.|:|    |.::.:...::| |.....:..::|....::.:.:     :||     .::||
plant   247 LRKSVADL----TTVLERCLNRLEWDRFQEEEKNKEEDEKEKERVQMVMIDWKDF-----AVVES 302

  Fly   227 CTKDSISAGKNWILQHSTDSAK---INVVLQYLLKKALVNGSTFQQKLHLIYLVNDILHHCMRKN 288
                         :..:.:..|   :.:.|:.:::::.|
plant   303 -------------IDFADEEDKDLPMPMTLEEVIRRSKV-------------------------- 328

  Fly   289 INDLKNSLENVVIPMFCSADLIGNPDQRQKLAKLLSLWESKAKFFDACVISKLQSPDSSMQEYKT 353
                 :::|.         |.|..|.:..:    :.:.|.:.|.    |...:::  ::::||..
plant   329 -----SAMEE---------DEIVEPGKEVE----MDMDEEEVKL----VAEGMRA--ANLEEYVG 369

  Fly   354 NLQNTHHDITAKFTQNTKATLDNY---QKQHHVFIQHASQQIVQLEKQAQHLEQQIVAQKSQQQH 415
            ::: ...:...:..:|.|...|.:   :....|.|...:.:::.:.:.::|:...::..|.::|.
plant   370 SVE-IEEEAPMRIVKNWKRPEDRFLTERDSSKVVISRITGELIPITEMSEHMRISLIDPKFKEQK 433

  Fly   416 -----------MLQHQQ--KNIPSLMSHRIAMPGDHEHMNSQG------PHDQQHPQA---GNNM 458
                       :.|..:  |||..|...|..:.|..|...|..      ..|:|..|.   |:..
plant   434 DRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEEEVSNAVKADIEKKDEQPKQVIWDGHTG 498

  Fly   459 YPGGNFQQQQPPPGNH------FADPR---GPNFFIPDMSKPPPGFP--GPMHHNQGPAMGQQQP 512
            ..|....|......|.      :.||.   ||..|.|    |.||.|  .|:...|..|:...:|
plant   499 SIGRTANQALTQNSNGEQGDGVYGDPNSFPGPAAFPP----PRPGVPTVRPLPPPQNLALNLPRP 559

  Fly   513 QPGQFPPMQAPGSGNEPPVDLGVLSAAIQACLQ-MQQQH---------HPD-----DPQQQ---- 558
            .|.    :|.||:    |..|||      ..:| |.|||         ||.     .||.|
plant   560 PPS----VQYPGA----PRPLGV------PMMQPMYQQHQLSMSGPHGHPSMMMSRPPQMQPVMR 610

  Fly   559 -----GQHQLQQQQQQQPQQQ--------KQPPPMAAYP------------QNIVRPGQQNADSS 598
                 |. |....|..||..|        .||||||..|            .....|.:|..|.|
plant   611 VPPPPGS-QFSHMQVPQPYGQLPPLSMGMMQPPPMAEMPPPPPPGEAPPPLPEEPEPKRQKLDES 674

  Fly   599 ----EVDLDVLNAAIRAVITNKPEDGTLEDGQQPQKLVDGESGEPV------VIGEPQIP 648
                |......:.....:..:||.:   .|||..:..|...| |.|      :.||.|||
plant   675 ALVPEDQFLAQHPGPATIRVSKPNE---NDGQVMEITVQSLS-ENVGSLKEKIAGEMQIP 730

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
scaf6	NP_001014589.1	Surp	13..61	CDD:280053	15/48 (31%)
		CTD_bind	271..329	CDD:282648	5/57 (9%)
		G-patch	885..933	CDD:279867
AT1G14640	NP_001319004.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0007
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1256232at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910