DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment scaf6 and AT4G31200

DIOPT Version :9

Sequence 1:	NP_001014589.1	Gene:	scaf6 / 3346235	FlyBaseID:	FBgn0261872	Length:	960	Species:	Drosophila melanogaster
Sequence 2:	NP_001320099.1	Gene:	AT4G31200 / 829247	AraportID:	AT4G31200	Length:	650	Species:	Arabidopsis thaliana

Alignment Length:	704	Identity:	156/704 - (22%)
Similarity:	237/704 - (33%)	Gaps:	252/704 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 PPRDASLRNIIDKLAEFVARNGPEFEAITKQKQQNNPKFEFLYGGEFANYYQFRVAAEQALLKQQ 69
            ||.|..|:..||||.|:..:|||||||:.:.:|::||.:.||:|||...||:::     ..|...
plant   120 PPADPELQKRIDKLVEYSVKNGPEFEAMMRDRQKDNPDYAFLFGGEGHGYYRYK-----HFLSMH 179

  Fly    70 AINQQLPPGAP--------SGHYMQHPP-----PMQQSQPPGLYPPPNQQPPHPPETAQDNMQQQ 121
                  |||.|        |...:.|||     |...:.|..|..||.:|||.||......:||.
plant   180 ------PPGGPFDPPFPSSSMPMIHHPPNPMMSPSMNNVPGALAVPPIRQPPFPPFHDHHQLQQH 238

  Fly   122 --TQHSWPPNSGNGGPPNNQQANGNPMAMNLTSQLEAIKMQQKSLREQIQQSEANLSAQHTALMN 184
              ..|.:.|::   .|..:|..:.   ...|:..|.|
plant   239 LPQPHPFAPHA---RPDFDQSTHA---FRGLSGPLPA---------------------------- 269

  Fly   185 QKTKQIEDAIAAAQTAQQEQMAGEQGIVLRDFDGVLQPIIESCTKDSISAGKNWILQHSTDSAKI 249
                               .:|.|...||.:.:|         ||:||.:.|.|.:|.|..:.
plant   270 -------------------DVAMELNGVLGNLNG---------TKESIKSAKIWFMQRSPFAP-- 304

  Fly   250 NVVLQYLLKKALVNGSTFQQKLHLIYLVNDILHHCMRKNINDLKNSLENVVI---PMFCSADLIG 311
              .|...|:..:.......:::|::||.||||...:::..|  .:..:|..:   |:..|  ::|
plant   305 --ALAEALRDRVFAMDDSDRQMHIVYLANDILFDSLQRRTN--LHEFDNEALAFRPILGS--MLG 363

  Fly   312 -------NPDQRQ-KLAKLLSLWESKAKFFDACVISKLQSPDSSMQEYKTNLQNTHHDITAKFTQ 368
                   |.::.| :|.|:|..|.|| :.||...||.|:      :|.|:..           ..
plant   364 RIYHFPQNKEENQSRLEKILQFWASK-EVFDQDTISSLE------KEMKSGP-----------PA 410

  Fly   369 NTKATLDNYQKQHHVFIQHASQQIVQLEKQAQHLEQQIVAQKSQQQHMLQHQQKNIPSLMSHRIA 433
            ||              ..|:                                    |.:.:|.:.
plant   411 NT--------------FSHS------------------------------------PIIAAHALQ 425

  Fly   434 MPGDHEHMNSQGPHDQQHPQAGNNMYPGGNFQQQQPPPGN--------HFADPRGPNFFIPDMSK 490
            .||                            ..||||..|        |..:|.....|||:: .
plant   426 RPG----------------------------MLQQPPNSNVSSTMNLEHLTNPVATQQFIPNV-M 461

  Fly   491 PPPGFPGPMHHNQG------PAMGQQQPQPGQFPPMQAPGSGNEPPVDLGVLSAAIQACLQMQQQ 549
            ||..|||.:..|..      |..|::.|....|||...||...:..:..||..:.:.. |.:...
plant   462 PPGAFPGSIPLNASVPPPTQPPAGEKPPPYPLFPPGLIPGMVRKMQIGSGVPYSPLSP-LDIPTV 525

  Fly   550 HHPDD-PQQQGQHQLQQQQQQQPQQQKQPPPMAAYPQ----NIVRPGQQNADSS--------EVD 601
            ..|.| ||.:...::.:..::..:......||.:..|    |..|...|....:        :||
plant   526 IPPSDTPQSEVLERVSKFFKEIGEVNPSEGPMGSESQDDYDNYERDSPQRKGGACIPPPPNLQVD 590

  Fly   602 LDVLNAAIRAVITNKPEDGTLEDGQQPQKLVDGESGEPVVIGEPQIPTAP-YYD 654
                           ||.||..||...:|...|..|    :|....|..| .||
plant   591 ---------------PETGTYADGSTDKKSGSGRLG----LGATADPNEPTQYD 625

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
scaf6	NP_001014589.1	Surp	13..61	CDD:280053	22/47 (47%)
		CTD_bind	271..329	CDD:282648	18/68 (26%)
		G-patch	885..933	CDD:279867
AT4G31200	NP_001320099.1	SWAP	130..179	CDD:197818	23/53 (43%)
AT4G31200	NP_001320099.1	CTD_bind	275..400	CDD:398473	37/142 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	57	1.000	Domainoid score	I4022
eggNOG	1	0.900	-	-		E1_KOG0007
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	120	1.000	Inparanoid score	I1984
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0006072
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR12323
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X4367
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	6.050