Sequence 1: | NP_001014589.1 | Gene: | scaf6 / 3346235 | FlyBaseID: | FBgn0261872 | Length: | 960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_080451.4 | Gene: | Sf3a1 / 67465 | MGIID: | 1914715 | Length: | 791 | Species: | Mus musculus |
Alignment Length: | 885 | Identity: | 169/885 - (19%) |
---|---|---|---|
Similarity: | 281/885 - (31%) | Gaps: | 329/885 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 VQPPRDASLRNIIDKLAEFVARNGPEFEAITKQKQQNNPKFEFLYGGE-FANYYQFRVA------ 60
Fly 61 AEQ---ALLK-----QQAINQQLPPGAPSGHYMQHPPPMQQSQPPGLYPPPNQQPPHPPETAQDN 117
Fly 118 MQQQTQHSWPPNSGNGGPPNNQQANGNPMAMNLTSQLEAIKMQQKSLREQIQQSEAN-----LSA 177
Fly 178 QHTALMNQKTKQIEDAIAAAQTAQQEQMAGEQGIVLRDFDGVLQPIIESCTKDSISAGKNWILQH 242
Fly 243 STDSAKINVVLQYLLKKALVNGSTFQQKLHLIYLVNDILHHCMRKNINDLKNSLENVVIPMFCSA 307
Fly 308 DLIGNPDQRQKLAKLLSLWESKAKFFDACVISKLQSPDSSMQEYKTNLQNTHHDITAKFTQNTKA 372
Fly 373 TL-DNYQKQHHVFIQHASQQIVQLEKQAQHLEQQIVAQKSQQQHMLQHQQKNIPSLMSHRIAMPG 436
Fly 437 DHEHMNSQGPHDQQHPQAGNNMYPGGNFQQQQPPPGNHFADPRGP--------NFFIPDMSKPPP 493
Fly 494 GFPGPMHHNQGPAMGQQQP--------QPGQFPP------------------MQAPGSGNEPPVD 532
Fly 533 ---------LGVLSAAIQACLQMQQQHHPDD-------------PQQQGQHQLQQQQQ------- 568
Fly 569 ---------------QQPQQ--QKQPPPMAAYPQNIVRPGQQNADSSEVDLDVLNAAIRAVITNK 616
Fly 617 PEDGTLEDGQQPQKLVDGESGEPVVIGEPQIPTAPYYDLPAGLMV----PLIRLEDYNYKALDPA 677
Fly 678 --DIRLPAPAPQSERLTNALNAFYSAPS-------------H-DRPRDNEGWEKLGLYEYYKVKN 726
Fly 727 AARKQKEEEIKDGIREKSRSPSPIVLEKPLPKKSNKRVYR 766 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scaf6 | NP_001014589.1 | Surp | 13..61 | CDD:280053 | 27/54 (50%) |
CTD_bind | 271..329 | CDD:282648 | 5/57 (9%) | ||
G-patch | 885..933 | CDD:279867 | |||
Sf3a1 | NP_080451.4 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..41 | ||
SWAP | 50..103 | CDD:197818 | 28/52 (54%) | ||
SURP motif 1 | 52..94 | 23/41 (56%) | |||
Surp | 165..215 | CDD:307771 | 15/101 (15%) | ||
SURP motif 2 | 166..208 | 12/43 (28%) | |||
PRP21_like_P | 232..470 | CDD:315004 | 46/326 (14%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 318..411 | 20/123 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 486..516 | 3/29 (10%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 528..582 | 12/78 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 664..684 | 5/26 (19%) | |||
Required and sufficient for nuclear import. /evidence=ECO:0000250|UniProtKB:Q15459 | 678..700 | 8/34 (24%) | |||
SF3a120_C | 716..791 | CDD:176395 | 0/4 (0%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0007 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1256232at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |