Sequence 1: | NP_001014589.1 | Gene: | scaf6 / 3346235 | FlyBaseID: | FBgn0261872 | Length: | 960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_650583.1 | Gene: | Sf3a1 / 42048 | FlyBaseID: | FBgn0266917 | Length: | 784 | Species: | Drosophila melanogaster |
Alignment Length: | 843 | Identity: | 170/843 - (20%) |
---|---|---|---|
Similarity: | 262/843 - (31%) | Gaps: | 341/843 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 VQPPRDASLRNIIDKLAEFVARNGPEFEAITKQKQQNNPKFEFLYGGE-FANYYQFRV------- 59
Fly 60 -----------------AA---EQALLKQQAINQQLPPGAPSGHYMQHPPPMQQ--SQPPG---- 98
Fly 99 --------------------------------------------------------LYPPPN--- 104
Fly 105 --QQPPHPPETAQDNMQQQTQH--SW--------------------------------------- 126
Fly 127 PPNSGNGGPPNN--------------------------QQANGNPMAMNLTSQLEAIKMQQKSLR 165
Fly 166 EQIQQSEANLSAQHTALMNQKTKQIEDAIAAAQ------TAQQEQMA-----GEQGIVLRDFD-G 218
Fly 219 VLQP----------IIESCTKDSISAGKNWILQHSTDSAKINVVLQYLLKKALVNGSTFQQK-LH 272
Fly 273 LIYLVNDILHHCMRKNINDLKNSLENVVIPMFCSADLIGNPDQRQKLAKLLSLWESKAKFF---- 333
Fly 334 DACVISKLQSPDSSMQEYKTNLQNTHHDITAKFTQNTKATLDNYQKQHHVFIQHASQQIVQLEKQ 398
Fly 399 AQHLEQQI-----------VAQKSQQQHMLQHQQKNIPSLMSHRIAMPGDHEHMN---SQGPHDQ 449
Fly 450 QHPQAGNNMYPGGNFQQQQPPPGNHFADPRGPNFFIPDMSKPPPGFPGPMHHNQGPAMGQQQPQP 514
Fly 515 GQFPPMQAPGSGNEPPVDLGVLSAAIQACLQMQQQHHPDDPQQQGQHQLQQQQQQQPQ-----QQ 574
Fly 575 KQPPPMAAYPQNIVRPGQQNADSSEVDLD----VLNAAIRAVITN---KPEDGTLEDGQQPQK 630 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scaf6 | NP_001014589.1 | Surp | 13..61 | CDD:280053 | 28/72 (39%) |
CTD_bind | 271..329 | CDD:282648 | 10/57 (18%) | ||
G-patch | 885..933 | CDD:279867 | |||
Sf3a1 | NP_650583.1 | SWAP | 36..89 | CDD:197818 | 29/52 (56%) |
Surp | 150..200 | CDD:280053 | 0/49 (0%) | ||
PRP21_like_P | 227..479 | CDD:289034 | 48/299 (16%) | ||
SF3a120_C | 709..784 | CDD:176395 | 12/40 (30%) | ||
UBQ | 713..777 | CDD:214563 | 10/36 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0007 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1256232at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |