Protein Alignment scaf6 and Cherp

DIOPT Version :9

• Sequence 1: NP_001014589.1
• Gene: scaf6 / 3346235
• FlyBaseID: FBgn0261872
• Length: 960
• Species: Drosophila melanogaster
• Sequence 2: XP_006252858.1
• Gene: Cherp / 290614
• RGDID: 1305279
• Length: 946
• Species: Rattus norvegicus
• Alignment Length: 1093
• Identity: 369/1093 - (33%)
• Similarity: 496/1093 - (45%)
• Gaps: 300/1093 - (27%)

  Fly     5 PPRDASLRNIIDKLAEFVARNGPEFEAITKQKQQNNPKFEFLYGGEFANYYQFRVAAEQALLKQQ 69
            ||.|..|||:|||||:||||||||||.:|.:||::||||.||:||||.:||:.::|.||    ||
  Rat     6 PPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKLALEQ----QQ 66

  Fly    70 AINQQLPPGAPSGHYMQHPPPMQQSQPPGLYP----PPNQQPPHPPETAQDNMQQQTQHSWPPNS 130
            .|.:|                    |.|.|.|    ||..|||..| ||          |..|
  Rat    67 LICKQ--------------------QAPELEPTSAMPPLPQPPLAP-TA----------SLTP-- 98

  Fly   131 GNGGPPNNQQANGNPMAMNLTSQLEAIKMQQKSLREQIQQSEANLSAQHTALMNQKTKQIEDAIA 195
                      |.|.|                 |:.|.||||:.:|..|...|:..:.:|:..|:|
  Rat    99 ----------AQGTP-----------------SMDELIQQSQWSLQQQEQHLLALRQEQVTTAVA 136

  Fly   196 AAQTAQQEQMAGEQGIVLRDFDGVLQPIIESCTKDSISAGKNWILQHSTDSAKINVVLQYLLKKA 260
            .|...|.:::..|..:.:.:||.:|||||::||||:|||||||:..::.......::..:|..:.
  Rat   137 HAVEQQMQKLLEETQLDMSEFDNLLQPIIDTCTKDAISAGKNWMFSNAKSPPHCELMAGHLRNRI 201

  Fly   261 LVNGSTFQQKLHLIYLVNDILH-----------HCMRKNINDLKNSLENVVIPMFCSADLIGNPD 314
            ..:|:.|:.:||||||:||:||           |..||...:|..:|:.||:|::|::.|....|
  Rat   202 TADGAHFELRLHLIYLINDVLHHWALTRGRSLPHSQRKQARELLAALQKVVVPIYCTSFLAVEED 266

  Fly   315 QRQKLAKLLSLWESKAKFFDACVISKLQSPDSSMQEYKTNLQNTHHDITAKFTQNTKATLDNYQK 379
            ::||:|:||.||| |..:||..:|.:||||...:.:|:..|.|.:..:........:..:.:.:.
  Rat   267 KQQKIARLLQLWE-KNGYFDDSIIQQLQSPALGLGQYQATLINEYSSVVQPVQLAFQQQIQSLKT 330

  Fly   380 QHHVFIQHASQQIVQLEKQAQHLEQQIVAQKSQQQHMLQHQQKNI-------------------- 424
            ||..|:...:||     :|.|..:||...|..|.|..|...:.::
  Rat   331 QHEEFVSSLAQQ-----QQQQQQQQQPPQQPPQPQIQLPPMEADVKATPPPSAPPPASAPAPTIP 390

  Fly   425 ----PSLMSHRIAMPGDHEHMNS-------------QGPH-----------DQQHPQAGNNMYPG 461
                |......|.|||..|:..|             .|||           ||.||.|     |.
  Rat   391 PTTQPDDNKPPIQMPGSSEYDTSAGVQDPAAAGPRGPGPHEQIPPNKPPWFDQPHPVA-----PW 450

  Fly   462 GNFQQQQP---------------PPGNH-----FADPRGPNFFIPDMSKPPPGFPGPMHHNQ--G 504
            |  |||.|               ||.|:     :.:.||...:......|....|.|..:||  |
  Rat   451 G--QQQPPEQPPYPHHQGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPWNNQPDPNWNNQFEG 513

  Fly   505 PAMGQQQPQP-------------------GQFPPMQAPGSGNEPPVDLGVLSAAIQACLQMQQQH 550
            |...|.:|.|                   |.|||.|.....|:||
  Rat   514 PWNNQHEPPPWGGAQREPPFRMQRPPHFRGPFPPHQQHPQFNQPP-------------------- 558

  Fly   551 HPDDPQQQGQHQLQQ------QQQQQPQQQKQPPPMAAYPQNIVRP-GQQNADSSEVDLDVLNAA 608
            ||        |...:      |....|:...:.||   ||.....| |...||        :...
  Rat   559 HP--------HNFNRFPPRFMQDDFPPRHPFERPP---YPHRFDYPQGDFPAD--------MGPP 604

  Fly   609 IRAVITNKPEDGTLED-----------GQQPQKLVDGESGEPVVI---GEPQI--------PTAP 651
            ........|..|..|.           |..|.    |.:|:|..:   |.|.|        |..|
  Rat   605 HHHPGHRMPHPGINEHPPWAGPQHPDFGPPPH----GFNGQPPHMRRQGPPHINHDDPSLVPNVP 665

  Fly   652 YYDLPAGLMVPLIRLEDYNYKALDPADIRLPAPAPQSERLTNALNAFYSAPSHDRPRDNEGWEKL 716
            |:|||||||.||::|||:.||.|||.|||||.|.|.||||..|:.||||.|||||||::||||:.
  Rat   666 YFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQN 730

  Fly   717 GLYEYYKVKNAARKQKEEEIKDGIREKSRSPSPIVLEKPLPKKSNKRVYRSKSRSRSRSKTPPHR 781
            ||||:::.|..||::|.:|.::....:|.|.|             |...||.|||.||| :...|
  Rat   731 GLYEFFRAKMRARRRKGQEKRNSGPSRSHSRS-------------KSRGRSSSRSSSRS-SKSSR 781

  Fly   782 DRSLSRSRSRSRSMERSLTPPPMNRSRLGGGNNRKGRNRSPRHERDNNSGSTNTREGRGDRGNSN 846
            ..|.|||||||||..||     .:|||   ..:|..|:||                    |..|.
  Rat   782 SSSRSRSRSRSRSSSRS-----RSRSR---SRSRSSRSRS--------------------RSRSR 818

  Fly   847 SRDNGNSTNLRRVDRDRSLTPPSF--LGSTFAKPA--DFIEESNKGHQMLMKMGWAGTGTGLGSK 907
            ||....|...||..|.||.||||.  |||..|.|.  ..:.|.|||||||:||||:|:| |||:|
  Rat   819 SRSKSYSPGRRRRSRSRSPTPPSAAGLGSNSAPPIPDSRLGEENKGHQMLVKMGWSGSG-GLGAK 882

  Fly   908 NQGIDTPISGGEVRDRREMYKGVGANMHDPFESFRKNKGAAFAHRMRSRDDKS 960
            .|||..||.||:|||:.:.|||||..:.||:|::|:||..:|..||::||:.|
  Rat   883 EQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENYRRNKSYSFIARMKARDEFS 935

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scaf6	NP_001014589.1	Surp	13..61	CDD:280053	31/47 (66%)
		CTD_bind	271..329	CDD:282648	29/68 (43%)
		G-patch	885..933	CDD:279867	32/47 (68%)
Cherp	XP_006252858.1	SWAP	13..65	CDD:197818	35/55 (64%)
		CTD_bind	212..282	CDD:282648	30/70 (43%)
		G_patch	858..908	CDD:197727	33/50 (66%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166354235
Domainoid	1	1.000	190	1.000	Domainoid score	I3187
eggNOG	1	0.900	-	-		E1_KOG4368
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	486	1.000	Inparanoid score	I1386
OMA	1	1.010	-	-		QHG48532
OrthoDB	1	1.010	-	-		D1256232at2759
OrthoFinder	1	1.000	-	-		FOG0006072
OrthoInspector	1	1.000	-	-		oto98278
orthoMCL	1	0.900	-	-		OOG6_108174
Panther	1	1.100	-	-	LDO	PTHR12323
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X4367
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.860