DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr2 and cadm2

DIOPT Version :9

Sequence 1:NP_001014480.4 Gene:dpr2 / 3346227 FlyBaseID:FBgn0261871 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_031751706.1 Gene:cadm2 / 448238 XenbaseID:XB-GENE-998536 Length:441 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr2NP_001014480.4 IG_like 113..206 CDD:214653
Ig 116..192 CDD:299845
ig 220..306 CDD:278476
IG_like 220..306 CDD:214653
cadm2XP_031751706.1 IgV_1_Necl-3 34..129 CDD:409498
Ig strand B 48..52 CDD:409498
Ig strand C 61..65 CDD:409498
Ig strand E 95..99 CDD:409498
Ig strand F 109..114 CDD:409498
Ig strand G 121..124 CDD:409498
IgI_2_Necl-3 128..231 CDD:409467
Ig strand B 150..154 CDD:409467
Ig strand C 164..168 CDD:409467
Ig strand E 194..198 CDD:409467
Ig strand F 208..213 CDD:409467
Ig strand G 224..227 CDD:409467
IGc2 248..311 CDD:197706
Ig strand B 250..259 CDD:409353
Ig strand C 265..271 CDD:409353
Ig strand C' 274..277 CDD:409353
Ig strand D 280..285 CDD:409353
Ig strand E 286..293 CDD:409353
Ig strand F 300..308 CDD:409353
Ig strand G 311..321 CDD:409353
4.1m 394..412 CDD:128590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 82 1.000 Inparanoid score I5030
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.