DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr2 and Igdcc4

DIOPT Version :9

Sequence 1:NP_001014480.4 Gene:dpr2 / 3346227 FlyBaseID:FBgn0261871 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_038937673.1 Gene:Igdcc4 / 363081 RGDID:1310919 Length:1345 Species:Rattus norvegicus


Alignment Length:274 Identity:65/274 - (23%)
Similarity:104/274 - (37%) Gaps:52/274 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 DFGM-PRNITTRTGHTAAINCRVDNLGDKSVSWIRKRDLHILTAGILTYTSDERFKVVRTADSKD 172
            ||.: |.:.|.....||...|..:.|....::|.:.:         :|.|.:.|...:     .:
  Rat   236 DFSLHPESQTVEENGTARFECHTEGLPAPIITWEKDQ---------VTVTEEPRLITL-----PN 286

  Fly   173 WTLHVKYAQPRDSGIYEC--------QVNTEPKISMAFRLNVIVTPPDAKAIIAGPTDLYVKVGS 229
            ..|.:...|..|:|.|.|        :.:.|..:|:|.|.::..|......|:|.|.:..|..|.
  Rat   287 GVLQILDVQDSDAGSYRCVATNSARQRFSQEALLSVALRGSLEATRGQDVVIVAAPENTTVVSGQ 351

  Fly   230 SVTLTCHVKQPATSAQDIGPIYWYRGPYILTPFVAHPNDAAIDLQRISMESTLAEKLQSRLRIAN 294
            ||.|.|     ..||..             ||||:....   |.:.||.:..:..:  :.|.||:
  Rat   352 SVVLEC-----VASADP-------------TPFVSWVRQ---DGKPISTDVIVLGR--TNLLIAS 393

  Fly   295 AQLLDTGNYTC---MPTTAEAASVVVNVINDESPAAMQKSRAI-RTSGSMRSSRLVLLLAMVASS 355
            ||...:|.|.|   .|.|.:.|:....:....:||..|...|: ||..|  ::|.|...:.....
  Rat   394 AQPRHSGVYVCRANKPRTRDFATAAAELRVLAAPAISQAPEALSRTRAS--TARFVCRASGEPRP 456

  Fly   356 VVRWLIGGQRIGSN 369
            .:.||..|..:..|
  Rat   457 TLHWLHDGAPLRPN 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr2NP_001014480.4 IG_like 113..206 CDD:214653 20/100 (20%)
Ig 116..192 CDD:299845 15/83 (18%)
ig 220..306 CDD:278476 24/88 (27%)
IG_like 220..306 CDD:214653 24/88 (27%)
Igdcc4XP_038937673.1 Ig 131..223 CDD:416386
Ig strand A' 135..138 CDD:409353
Ig strand B 144..154 CDD:409353
Ig strand C 160..165 CDD:409353
Ig strand C' 167..169 CDD:409353
Ig strand D 175..179 CDD:409353
Ig strand E 182..187 CDD:409353
Ig strand F 209..217 CDD:409353
Ig_3 237..308 CDD:404760 17/84 (20%)
Ig strand A' 243..246 CDD:409353 0/2 (0%)
Ig strand B 252..259 CDD:409353 2/6 (33%)
Ig strand C 265..270 CDD:409353 1/4 (25%)
Ig strand C' 272..274 CDD:409353 0/10 (0%)
Ig strand D 280..284 CDD:409353 1/3 (33%)
Ig strand E 287..292 CDD:409353 1/4 (25%)
Ig strand F 300..308 CDD:409353 3/7 (43%)
Ig strand G 316..324 CDD:409353 2/7 (29%)
IG_like 342..423 CDD:214653 27/103 (26%)
Ig strand A' 342..347 CDD:409353 1/4 (25%)
Ig strand B 353..360 CDD:409353 3/11 (27%)
Ig strand C 366..371 CDD:409353 2/4 (50%)
Ig strand C' 373..375 CDD:409353 1/1 (100%)
Ig strand D 381..384 CDD:409353 0/2 (0%)
Ig strand E 387..393 CDD:409353 2/5 (40%)
Ig strand F 400..407 CDD:409353 3/6 (50%)
Ig 442..514 CDD:416386 7/31 (23%)
Ig strand B 443..451 CDD:409353 2/7 (29%)
Ig strand C 457..462 CDD:409353 1/4 (25%)
Ig strand C' 464..467 CDD:409353 1/2 (50%)
Ig strand D 472..476 CDD:409353
Ig strand E 478..485 CDD:409353
Ig strand F 494..501 CDD:409353
Ig strand G 505..514 CDD:409353
fn3 522..607 CDD:394996
FN3 619..712 CDD:238020
fn3 724..818 CDD:394996
FN3 842..934 CDD:238020
FN3 942..1034 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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