DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr2 and Tyro3

DIOPT Version :9

Sequence 1:NP_001014480.4 Gene:dpr2 / 3346227 FlyBaseID:FBgn0261871 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_058788.1 Gene:Tyro3 / 25232 RGDID:3923 Length:880 Species:Rattus norvegicus


Alignment Length:327 Identity:67/327 - (20%)
Similarity:117/327 - (35%) Gaps:100/327 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GMPRNITTRTGHTAAINCRVDNLGDKSVSWIRKRDLHILTAGILTYTSDERFKVVRTADSKDW-- 173
            |.|..:|...|....:||.|:.:.|..:.|::.        |.:...:.:   |..:...::|  
  Rat    37 GAPVKMTVSQGQPVKLNCSVEGMDDPDIHWMKD--------GAVVQNASQ---VSISISEQNWIG 90

  Fly   174 TLHVKYAQPRDSGIYECQV--NTEPKISMAFRLNVIVTPPDAKAIIAGPTDLYVKVGSSVTLTCH 236
            .|.:|.|:..|:|:|.|||  ..|.|||.:..|.|...|    .....|.||.|.......|:| 
  Rat    91 LLSLKSAERSDAGLYWCQVKDGEETKISQSVWLTVEGVP----FFTVEPKDLAVPPNVPFQLSC- 150

  Fly   237 VKQPATSAQDIGP-----IYWYRGPYILTPFVAHPNDAAIDLQRISMESTLAEKLQSRLRIANAQ 296
                    :.:||     |:|:|||..:....:.|  :.:::..::..:..:             
  Rat   151 --------EAVGPPEPVTIFWWRGPTKVGGPASSP--SVLNVTGVTQRTEFS------------- 192

  Fly   297 LLDTGNYTCMPTTAEAASVVVNVINDESPAAMQKSRAIRTSGSMRSSRLVLLLAMVASSVVRWLI 361
             .:..|...:.|:..|      :|..::|.|...:..:.|..|..:|             |.|:.
  Rat   193 -CEAHNIKGLATSRPA------IIRLQAPPAAPFNITVTTISSSNAS-------------VAWVP 237

  Fly   362 GGQRIG-SNSCHDSCSNLSTLHINY------------------CNLR--AKITSHLKEHRC---L 402
            |...:. .:||        |:.:.:                  |.||  |..|::....||   |
  Rat   238 GADGLALLHSC--------TVQVAHAPGEWEALAVVVPVPPFTCLLRNLAPATNYSLRVRCANAL 294

  Fly   403 GP 404
            ||
  Rat   295 GP 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr2NP_001014480.4 IG_like 113..206 CDD:214653 25/96 (26%)
Ig 116..192 CDD:299845 17/77 (22%)
ig 220..306 CDD:278476 15/90 (17%)
IG_like 220..306 CDD:214653 15/90 (17%)
Tyro3NP_058788.1 IG_like 39..125 CDD:214653 25/96 (26%)
IGc2 46..111 CDD:197706 18/75 (24%)
Ig2_Tyro3_like 131..209 CDD:143226 17/108 (16%)
IG_like 135..204 CDD:214653 15/93 (16%)
FN3 215..307 CDD:238020 20/103 (19%)
fn3 315..396 CDD:278470
PTKc_Tyro3 498..781 CDD:270659
Pkinase_Tyr 508..776 CDD:285015
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 804..827
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 842..864
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.