DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr2 and Opcml

DIOPT Version :9

Sequence 1:NP_001014480.4 Gene:dpr2 / 3346227 FlyBaseID:FBgn0261871 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_017450901.1 Gene:Opcml / 116597 RGDID:620635 Length:354 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr2NP_001014480.4 IG_like 113..206 CDD:214653
Ig 116..192 CDD:299845
ig 220..306 CDD:278476
IG_like 220..306 CDD:214653
OpcmlXP_017450901.1 Ig 44..132 CDD:416386
Ig strand A' 44..49 CDD:409353
Ig strand B 51..59 CDD:409353
CDR1 59..63 CDD:409353
FR2 64..70 CDD:409353
Ig strand C 64..70 CDD:409353
CDR2 71..83 CDD:409353
Ig strand C' 72..76 CDD:409353
Ig strand C' 80..83 CDD:409353
FR3 84..118 CDD:409353
Ig strand D 87..94 CDD:409353
Ig strand E 97..103 CDD:409353
Ig strand F 110..118 CDD:409353
CDR3 119..123 CDD:409353
Ig strand G 123..132 CDD:409353
FR4 125..132 CDD:409353
Ig_3 135..206 CDD:404760
Ig strand A 135..138 CDD:409353
Ig strand A' 144..148 CDD:409353
Ig strand B 151..160 CDD:409353
Ig strand C 165..170 CDD:409353
Ig strand C' 171..174 CDD:409353
Ig strand F 198..206 CDD:409353
Ig_3 223..300 CDD:404760
putative Ig strand A 224..230 CDD:409353
Ig strand B 240..244 CDD:409353
Ig strand C 253..257 CDD:409353
Ig strand E 279..283 CDD:409353
Ig strand F 293..298 CDD:409353
Ig strand G 306..309 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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