DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr2 and LOC100333939

DIOPT Version :9

Sequence 1:NP_001014480.4 Gene:dpr2 / 3346227 FlyBaseID:FBgn0261871 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_002666233.3 Gene:LOC100333939 / 100333939 -ID:- Length:245 Species:Danio rerio


Alignment Length:221 Identity:50/221 - (22%)
Similarity:89/221 - (40%) Gaps:29/221 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 NITTRTGHTAAINCRVDNLGDKSVSWIRK--------RDLHILTAGILTYTSDERFKVVRTADSK 171
            :::...|.:..::..|.....::::|...        .||....||:.....|.:|:.....||:
Zfish    27 SVSVAEGQSVTLDTNVKVNQQQNITWSFSDEVIAEITGDLSFNCAGVQCEGGDGKFRNRLKLDSQ 91

  Fly   172 DWTLHVKYAQPRDSGIYECQVNTEPKISMAFRLNVIVTPPDAKAIIAGPTDLYVKVGSSVTLTCH 236
            ..:|.:|..:..|:|:|:.|:|.|.:.|...   .|||......:.:....::|..|.||||...
Zfish    92 TGSLTIKDIRITDTGVYKLQINNESRQSEKI---FIVTV
IGFFHVGSYGEPVFVVKGDSVTLQSG 153

  Fly   237 VKQPATSAQDIGPIYWYRGPYILTPFVAHPNDAAIDLQRISMESTLAEKLQSRLRIANAQLLD-- 299
            |:   |:.|:  .|.||.....:.....       |..:|   .|..|..:...|..|...||  
Zfish   154 VE---TNQQE--KIRWYFNNIRIAQITG-------DFTKI---CTGVECNEGNERFRNRLQLDHQ 203

  Fly   300 TGNYTCMPTTAEAASVV-VNVINDES 324
            ||:...|..|...:.|: :.|.:::|
Zfish   204 TGSLAIMNITNTDSGVLRLRVFSNDS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr2NP_001014480.4 IG_like 113..206 CDD:214653 20/98 (20%)
Ig 116..192 CDD:299845 16/83 (19%)
ig 220..306 CDD:278476 22/87 (25%)
IG_like 220..306 CDD:214653 22/87 (25%)
LOC100333939XP_002666233.3 IG_like 26..127 CDD:214653 22/102 (22%)
Ig 33..120 CDD:299845 19/86 (22%)
Ig 145..229 CDD:299845 25/98 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.