DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and asic1a

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_021333995.1 Gene:asic1a / 791696 ZFINID:ZDB-GENE-040513-2 Length:614 Species:Danio rerio


Alignment Length:474 Identity:97/474 - (20%)
Similarity:177/474 - (37%) Gaps:82/474 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IEEYLKNSTLHGARFIVDKDASWIERIFWVICLVAS-WYASWLLIKASLSAFENNAISFVVE--- 67
            ::.:...|||||...|...:....:...||:..::| .:..::.|         :.|.|.:|   
Zfish   136 LQVFAHTSTLHGISHIFSYEKITAKCCLWVVFFLSSLTFLMYVCI---------DRIQFYLEYPH 191

  Fly    68 -SSFRDWNTN---FPAIIVCESKNMDRIQEVAEQLWGADHDFTLEEVLSEIAFFRGESYHTVHEC 128
             :...:..|.   |||:.:|...::...:.....|:.|.....|.....|:     ...|.|.|.
Zfish   192 VTKLDEITTPVMVFPAVTICNLNSIRFSRITRNDLYHAGELLALLNSRHEV-----REAHLVEES 251

  Fly   129 SGEEVTASCFYSNF--------SYYAELVRSSCVDSISNCEWNNKPFECCK--YFHRMETELGIC 183
            ..|.:.:...:.:|        .:| ........|.:.:|::...|   |:  .|..:.|..|.|
Zfish   252 VMEVLKSKTDFRSFKPRHFNMWEFY-NRTGHDIKDMLLSCQFRGSP---CRPEDFSVVFTRYGKC 312

  Fly   184 YAINSMQAGKPKMP---------------KLNMY------SNRGSGPGALKMELHTEATVFILGT 227
            |..||.:.|.|::.               :.:.|      |:..|....:|:::|::        
Zfish   313 YTFNSGETGPPRVSVKGGMGNGLEIMLDIQQDEYLPVWGESDESSFEAGIKVQIHSQ-------- 369

  Fly   228 EEVPTLVTPKTDFLVVGPYISFVRYISKRDIENDEEIRQTSVHQRNCRFADENILDVHKFYSYSA 292
            :|.|.:     |.|..|....|..::|.:    ::.:........:|:....: .|..:.||.||
Zfish   370 DEPPFI-----DQLGFGVAPGFQTFVSCQ----EQRLVYLPAPWGSCKSTPPS-SDYFRAYSISA 424

  Fly   293 CTVQCRKDRQMELCNCSS-HLSPNSPD-----WQLCNMEGLECLNRNYEDLSVIIAKWSKLRGRK 351
            |...|.....:|.|||.. |:..::|.     ::.|....|:.|.....|........:..|..|
Zfish   425 CRTDCETRYLVENCNCRMVHMPGDAPYCTPVLYKECAHPALDFLVETDSDYCSCETPCNITRYSK 489

  Fly   352 GLVCDCLPSCTEVDITTVYDSKENMAGSQNAISRIEVGLIELPTERYKRNLVRGKLDLVVSIGGT 416
            .|....:||...|.......||.....::| :..::|....|..|..::........|:..|||.
Zfish   490 ELSFVKIPSKASVKYLAKKYSKSEKYITEN-VMVLDVFFEALNYETIEQRKAYEVAGLLGDIGGQ 553

  Fly   417 TGLFVGASLLSFVEIFYYI 435
            .|||:|||:|:.:|:|.|:
Zfish   554 MGLFIGASILTILELFDYL 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 96/468 (21%)
asic1aXP_021333995.1 ASC 136..582 CDD:322155 97/474 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3633
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.050

Return to query results.
Submit another query.