DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and scnn1b

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001072437.1 Gene:scnn1b / 779891 XenbaseID:XB-GENE-949109 Length:646 Species:Xenopus tropicalis


Alignment Length:606 Identity:115/606 - (18%)
Similarity:207/606 - (34%) Gaps:203/606 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FSRVIEEYLKNSTLHGARFIVDKDASWIERIFW-VICLVASWYASW---LLIKASLSAFENNAIS 63
            :..::..:..|:..||.:.|:.:...  :|:.| ::.||.:....|   :||...||    ..:|
 Frog    28 YKELLVWFCDNTNTHGPKRIIKEGPK--KRVMWFILTLVFAGLVFWQWGVLILTYLS----YGVS 86

  Fly    64 FVVESSFRDWNTNFPAIIVCESK--------------------NMDRIQEVAEQ----------- 97
            ..:...|:  ...|||:.||.:.                    .:||||..::.           
 Frog    87 VSLSIGFK--TMEFPAVTVCNANPYKYSRVKPLLKDLDALVATALDRIQFSSQDQANTFTQSSTN 149

  Fly    98 --------LWG----------------ADHDFTLEEVLSEIAFFRGE-----SYHTVHECSGEEV 133
                    ||.                .::.|....:.|:...||..     ||...::.:.:..
 Frog   150 QNVTLDPTLWNHIPLVVIDETDPSNPIVNNIFDNNAIYSKNNSFRNSSEDQTSYSQRYKVAMKLC 214

  Fly   134 T---ASCFYSNFS--------YYAELVRSSCV-----------------DSISNCEWNNKPFECC 170
            |   ..|.|.||:        :|  |::.|.:                 |.|..|.:..:|   |
 Frog   215 TNNNTQCVYRNFTSGIQALQEWY--LLQLSSIFSNVPLADRIAMGFKAEDLILTCLFGGQP---C 274

  Fly   171 KY--FHRM-ETELGICYAINSMQAGKPKMPKLNMYSNRGSGPGA---LKMELHTEATVFILGTEE 229
            .|  |.|: :.:.|.||..|..|.|:..|...|        |||   ||:.|..|.      .|.
 Frog   275 SYRNFTRIYDADYGNCYIFNWGQEGEDPMASAN--------PGADFGLKLVLDIEQ------GEY 325

  Fly   230 VPTLVTPKTDFLVVG-----PYISFVRYISKRDIEND-----EEIRQTSVHQRNCRFADENI--- 281
            :|.:.|.....|::.     |::..:...:....|..     :::........:|.....:|   
 Frog   326 LPYVQTTAAARLILHQQRSFPFVKDLGIYAMPGTETSIAVLVDQLEHMEAPYSSCTVNGSDIPVQ 390

  Fly   282 ---LDVHKFYSYSACTVQCRKDRQMELCNCSSHLSP-----------NSPDWQLCNMEGLE---- 328
               .:.:..||..:|...|.:::.::.|.|:.:..|           ..|||..| ..||.    
 Frog   391 NLYAEFNSSYSIQSCLRSCYQEQMVQTCGCADYQYPLPNGSEYCSNDKYPDWVPC-YYGLRDSVA 454

  Fly   329 ------------CLNRNYEDLSVIIAKWSKLRGRKGLVCDCLPSCTEVD-----ITTVYDSKENM 376
                        |.:..|: :.:.:|.|              ||....|     ::...||..|:
 Frog   455 DRESCISLCQQPCNDTQYK-MVISMADW--------------PSAGAQDWIFHVLSYEKDSSHNI 504

  Fly   377 AGSQNAISRIEVGLIELP----TERYKRNLVRGKLDLVVSIGGTTGLFVGASLLSFVEI------ 431
            ..::|.|.|:.:...|..    ||....|:|.    |:.::||..|.::|.|:|..:|.      
 Frog   505 TVNRNGIVRLNIYFQEFNYRSITESEATNVVW----LLSNLGGQFGFWMGGSVLCIIEFGEIIID 565

  Fly   432 FYYITIRPYTTYINEKRRLKR 452
            ..:|||.....:|.::|:.::
 Frog   566 CVWITILKLLAWIKDRRQRRQ 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 110/579 (19%)
scnn1bNP_001072437.1 ENaC 27..632 CDD:273304 115/606 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3633
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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