DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and asic1c

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_021325802.1 Gene:asic1c / 407670 ZFINID:ZDB-GENE-040513-3 Length:562 Species:Danio rerio


Alignment Length:540 Identity:107/540 - (19%)
Similarity:184/540 - (34%) Gaps:213/540 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YLKNSTLHGARFIVDKDASWIERIFWVICLVA------SWYASWLLIKASLSAFENNAISFV--- 65
            ::..:.:||.:.......|..:|:||::.|:.      :|  ||            |.|.::   
Zfish    41 FVLRTKVHGLKHAFSPHKSKTQRLFWLLALLVCLGLLFTW--SW------------NRILYLLSY 91

  Fly    66 --VESSFRDWNTN--FPAIIVCESKNMDRIQEVAEQLWGADHDFTLEEVLSEIAFFRG---ESYH 123
              |...:..|:.|  ||||..|   |.:|::              :..:..:..::.|   :..|
Zfish    92 PAVTKIYMVWSNNMTFPAITFC---NQNRLR--------------VSSLTRDDLYYSGYWMDILH 139

  Fly   124 TVHECSGEEVT---------ASCFYSNFSYYA-----ELVRSSCVDSISNCEWNNKPFEC----- 169
            ..|..:.:.|:         ......:||:|:     .|..:..:|.:.: :..:...||     
Zfish   140 LNHTLNRQSVSMLKHSRHRERLLHLLDFSHYSPPPDQSLNTTEMIDRLGH-QLQDMLLECRFRGE 203

  Fly   170 -CKY--FHRMETELGICYAINSMQAGKPKMPKLNMYSNRGSGPG--------------------- 210
             |.|  |..:.|..|.||..||...|.|.:..|    ..|:|.|                     
Zfish   204 NCTYKNFTPIYTRYGKCYTFNSGLDGNPLLTTL----KGGTGNGLEIMLDIQQDEYLPVWGDTDE 264

  Fly   211 -----ALKMELHTEATVFILGTEEVPTLVTPKTDFLVVGPYISFVRYISKRDIENDEEIRQTSVH 270
                 .:|:::|::        :|.|.:     |.|..|....|..::|.:        :|..::
Zfish   265 TSYEAGIKVQIHSQ--------DEPPFI-----DQLGFGVAPGFQTFVSCQ--------QQLLLY 308

  Fly   271 ----QRNCRFADENILDVHKF--YSYSACTVQCRKDRQMELCNCSSHLSPNSPDWQLCNMEGLE- 328
                ..:||.|.   :|...|  ||.:||.:.|.....:|.|||           ::.:|.|.. 
Zfish   309 LPPPWGDCRSAP---MDSEYFSTYSITACRIDCETRYLLENCNC-----------RMVHMPGTST 359

  Fly   329 -CLNRNYED-----LSVIIAKWSKLRGRKGLVCDCLPSCTEVDITTVYDSKENMAGSQNAISRIE 387
             |....|:|     |..::.|.:.       .|.|...|.    .|.|..              |
Zfish   360 VCTPEQYKDCADPALDFLVEKDND-------YCVCDTPCN----MTRYGK--------------E 399

  Fly   388 VGLIELP--------------TERY-----------------------KRNLVRGKLDLVVSIGG 415
            :.::::|              ||:|                       |...|.|   |:..|||
Zfish   400 LSMVKIPSKASAKYLAKKFNKTEQYITDNILVLDIFFEALNYEKIEQKKAYEVAG---LLGDIGG 461

  Fly   416 TTGLFVGASLLSFVEIFYYI 435
            ..|||:|||:|:.:|||.|:
Zfish   462 QMGLFIGASVLTILEIFDYL 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 106/537 (20%)
asic1cXP_021325802.1 ASC 34..531 CDD:322155 107/540 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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