DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and asic4b

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_999951.1 Gene:asic4b / 407667 ZFINID:ZDB-GENE-040513-6 Length:558 Species:Danio rerio


Alignment Length:511 Identity:119/511 - (23%)
Similarity:183/511 - (35%) Gaps:130/511 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IEEYLKNSTLHG-ARFIVDKDASWIERIFWVICLV---------ASWYASWLLIKASLSAFENNA 61
            :..:..:|:||| ||.:...:.....:..|.:.|:         |:|.|:..|.:..|:|..   
Zfish    44 LASFASSSSLHGLARALGTSERLGFRQTLWGLALLVSLGLFLYQATWSAATYLERPHLAALR--- 105

  Fly    62 ISFVVESSFRDWNTNFPAIIVCESKNMDRIQEVAEQLWGADHDFTLEEVLSEIAFFRG-----ES 121
                 |.:.|:  ..||||.:|   |::|.:..|  |..||        :..:|...|     ..
Zfish   106 -----EETRRE--LTFPAITLC---NVNRFRFSA--LTDAD--------IYHLANLTGLPPKSRK 150

  Fly   122 YHTVHECSGEEVTASCFYSNFSYYAELVRSSCVDSISNCEWNNKPFECCKYFHRMETELGICYAI 186
            .|...|...........:....:..|.:..||..|..||...:        |..:.|..|.||..
Zfish   151 GHRPSELQYPPPNMLDIFQRTGHQLEDMLKSCNFSGQNCSSED--------FSVVYTRYGKCYTF 207

  Fly   187 NSMQAGKPKMPKLNMYSNRGSGPGALKMELHTEATVFILGTEEVPTLVTPKTDFLVVG------- 244
            |    |....||.......|:|   |:|.|.      |...|.:|.........|..|       
Zfish   208 N----GNKTSPKRVRQGGTGNG---LEMMLD------IQQDEYLPIWRETNETTLEAGIRVQIHS 259

  Fly   245 ----PYI---------SFVRYISKRDIENDEEIRQTSVHQ--RNCRFADENILDVHKFYSYSACT 294
                |||         .|..::|      .:|.|.|.:.|  .|||.:.|.::..:..||.|||.
Zfish   260 QNEPPYIHQLGFGVSPGFQTFVS------CQEQRLTYLPQPWGNCRASSEPVIPGYDTYSVSACR 318

  Fly   295 VQCRKDRQMELCNCSSHLSPNSPDWQLCNMEGLECLNRNYEDLSVIIAKWSKLRGRKGLVCDCLP 359
            :.|...:....|||.....|...|  :|....::|:::       .:|...|..|..   |.|..
Zfish   319 LHCESTQVQRECNCRMVHMPGDAD--ICAPSKIKCVDK-------ALASLQKSTGDS---CPCET 371

  Fly   360 SCTEVDITTVYDSKENMA-----GSQNAISR---------------IEVGLIELPTERYKRNLVR 404
            .|.    .|.|..:.:|.     ||...:||               :::....|..|..::....
Zfish   372 PCN----LTRYGKELSMVKIPSRGSARYLSRKYQKSEEYIRDNFLILDIFFEALNYETIEQKKAY 432

  Fly   405 GKLDLVVSIGGTTGLFVGASLLSFVEIFYYITIRPYTTYINEKRRLKRLIIPKRFQ 460
            ....|:..|||..|||:|||:|:.:||..||       |...|.::|:|:.||:.|
Zfish   433 DIAGLLGDIGGQMGLFIGASILTILEILDYI-------YEVAKNKIKQLLKPKKSQ 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 110/480 (23%)
asic4bNP_999951.1 ASC 54..497 CDD:295594 117/501 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.