DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and Scnn1g

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_058742.2 Gene:Scnn1g / 24768 RGDID:3641 Length:650 Species:Rattus norvegicus


Alignment Length:590 Identity:106/590 - (17%)
Similarity:185/590 - (31%) Gaps:218/590 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YLKNSTLHGARFIVDKDASWIERIFWV-ICLVASWYASWLLIKASLSAFENNAISFVVESSFRDW 73
            |..|:..||.|.|| .....:.|:.|: ..|.|.....|   :.:|..|....:|..::..|:  
  Rat    32 YCMNTNTHGCRRIV-VSRGRLRRLLWIAFTLTAVALIIW---QCALLVFSFYTVSVSIKVHFQ-- 90

  Fly    74 NTNFPAIIVCESKNMDRIQEVAEQLWGADHDFTLEEVLSEIA----------------------- 115
            ..:|||:.:| :.|..:...|::.|...|.: |.:.:||...                       
  Rat    91 KLDFPAVTIC-NINPYKYSAVSDLLTDLDSE-TKQALLSLYGVKESRKRREAGSMPSTLEGTPPR 153

  Fly   116 FFR---------------------------GESYHT------VHE---------CSGEEVTASC- 137
            ||:                           |:..|.      |||         ||.:  |:.| 
  Rat   154 FFKLIPLLVFNENEKGKARDFFTGRKRKISGKIIHKASNVMHVHESKKLVGFQLCSND--TSDCA 216

  Fly   138 -------------FYS----------------NFSYYAELVRSSCVDSISNCEWNNKPFECCKYF 173
                         :|.                |.||.|:.:..:|.....:|:..|...    :.
  Rat   217 TYTFSSGINAIQEWYKLHYMNIMAQVPLEKKINMSYSAKELLVTCFFDGMSCDARNFTL----FH 277

  Fly   174 HRMETELGICYAINSMQ---------AGKPKMPKLNMYSNRG-------SGPGALKMELHTEATV 222
            |.|   .|.||..|:.:         .|.....::.:|.|..       |..|| |:.:|.:...
  Rat   278 HPM---YGNCYTFNNKENATILSTSMGGSEYGLQVILYINEDEYNPFLVSSTGA-KVLIHQQNEY 338

  Fly   223 -FI--LGTEEVPTLVTP-----KTDFLVVGPYISFVRYISKRDIENDEEIRQTSVHQRNCRFADE 279
             ||  :|.|....:.|.     ...|.:..||        .:..|:..::..|:::         
  Rat   339 PFIEDVGMEIETAMSTSIGMHLTESFKLSEPY--------SQCTEDGSDVPVTNIY--------- 386

  Fly   280 NILDVHKFYSYSACTVQCRKDRQMELCNCSSHLSPNSPDWQLCNME----GLECLNRNYEDLSVI 340
                 :..||...|...|.:.:.:|.|.|:.:..|..|....||.:    .:.|..:.|:     
  Rat   387 -----NAAYSLQICLYSCFQTKMVEKCGCAQYSQPLPPAANYCNYQQHPNWMYCYYQLYQ----- 441

  Fly   341 IAKWSKLRGRKGLVCDCLPSCT--EVDITT------------------VYDSKENMAGSQNAISR 385
                :.:|...|....|..||:  |..:||                  .:|..:.:....|....
  Rat   442 ----AFVREELGCQSVCKQSCSFKEWTLTTSLAQWPSEASEKWLLNVLTWDQSQQINKKLNKTDL 502

  Fly   386 IEV----------GLIELPTERYKRNLVRGKLDLVVSIGGTTGLFVGASLLSFVEI-------FY 433
            .::          .::|.|....:.        |:.:.||..||::..|::..:||       |:
  Rat   503 AKLLIFYKDLNQRSIMESPANSIEM--------LLSNFGGQLGLWMSCSVVCVIEIIEVFFIDFF 559

  Fly   434 YITIR 438
            .|..|
  Rat   560 SIIAR 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 104/584 (18%)
Scnn1gNP_058742.2 ENaC 24..631 CDD:273304 106/590 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..628
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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