DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and Asic4

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_036020902.1 Gene:Asic4 / 241118 MGIID:2652846 Length:586 Species:Mus musculus


Alignment Length:564 Identity:123/564 - (21%)
Similarity:190/564 - (33%) Gaps:195/564 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RVIEEYLKNSTLHGARFIVDKDASWIERIFWVICLVASWYASWLLIKASLS----------AFEN 59
            |.:..:...|||||...........:.|..|.:.|:.| .|::|...|||:          |.:.
Mouse    40 RDLATFASTSTLHGLGRACGPGPHGLRRTLWALALLTS-LAAFLYQAASLARGYLTRPHLVAMDP 103

  Fly    60 NAISFVVESSFRDWNTNFPAIIVCESKNMDRIQEVAEQLWGADHDFTLEEVLSEIAFFRG--ESY 122
            .|.:.|         ..|||:.:|   |::|.:..|  |..||        :..:|...|  ...
Mouse   104 AAPAPV---------AGFPAVTLC---NINRFRHSA--LSDAD--------IFHLANLTGLPPKD 146

  Fly   123 HTVHECSG----EEVTASCFYSNFSYYAELVRSSCVDSISNCEWNNKPFECCKYFHRMETELGIC 183
            ...|..:|    |..............|:::: ||..|..:|..:|        |..:.|..|.|
Mouse   147 RDGHRAAGLRYPEPDMVDILNRTGHQLADMLK-SCNFSGHHCSASN--------FSVVYTRYGKC 202

  Fly   184 YAINSMQAGKPKMPKLNMYSNRGSGPGALKMEL------------HTEATVFILG------TEEV 230
            |..|:       .|:.::.|..|.....|::.|            .|..|.|..|      ::|.
Mouse   203 YTFNA-------DPQSSLPSRAGGMGSGLEIMLDIQQEEYLPIWRETNETSFEAGIRVQIHSQEE 260

  Fly   231 PTLVTPKTDFLVVGPYI---------SFVRYISKRDIENDEEIRQTSVHQ--RNCRFADENI--- 281
            |             |||         .|..::|      .:|.|.|.:.|  .||| |:..:   
Mouse   261 P-------------PYIHQLGFGVSPGFQTFVS------CQEQRLTYLPQPWGNCR-AESELREP 305

  Fly   282 -LDVHKFYSYSACTVQCRKDRQMELCNC------SSHLSP---------NSPDWQLCN------- 323
             |..:..||.|||.::|.|:..::.|:|      ..||.|         .:...|.|.       
Mouse   306 ELQGYSAYSVSACRLRCEKEAVLQRCHCRMVHMPGGHLQPVFGATLLSSRTSRRQRCMRTTCTRI 370

  Fly   324 ---------MEG---------------LECLNRNYEDLSVIIAKWSKLRGRKGLVCDCLPSCTEV 364
                     |.|               :||.:...:.|.         .|.:| .|.|...|.  
Mouse   371 YTHERVLMCMSGYLHMGNETICPPNIYIECADHTLDSLG---------GGSEG-PCFCPTPCN-- 423

  Fly   365 DITTVYDSKENMA-----GSQNAISR---------------IEVGLIELPTERYKRNLVRGKLDL 409
              .|.|..:.:|.     ||...::|               ::|....|.:|..::....|...|
Mouse   424 --LTRYGKEISMVKIPNRGSARYLARKYNRNETYIRENFLVLDVFFEALTSEAMEQQAAYGLSAL 486

  Fly   410 VVSIGGTTGLFVGASLLSFVEIFYYITIRPYTTYINEKRRLKRL 453
            :..:||..|||:|||:|:.:||..||       |.....||||:
Mouse   487 LGDLGGQMGLFIGASILTLLEILDYI-------YEVSWDRLKRV 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 115/538 (21%)
Asic4XP_036020902.1 ASC 40..535 CDD:413546 123/564 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3633
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.940

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