DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk13 and asic-2

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:521 Identity:100/521 - (19%)
Similarity:173/521 - (33%) Gaps:147/521 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FSRVIEEYLKNSTLHGARFIVDKDASWIERIFWV----ICLVASWYASWLLIKA--SLSAFENNA 61
            |.::.:::...||:.....:.:.: :.|.||||:    ..|....|..::||..  |..|..|..
 Worm     6 FVQIFKDFSNWSTVAVVPHVANAN-NKISRIFWIAIFLFVLGMFAYELYILIAKFFSYPATVNTE 69

  Fly    62 ISFVVESSFRDWNTNFPAIIVCESKNMD--------------------------RIQEVAEQLWG 100
            |.|..:.        ||.:.||   ||:                          .:...:...||
 Worm    70 ILFEKQI--------FPVVTVC---NMNPYKYSVVKSNSAFSSVNTLMTTYSDATVGTFSTDKWG 123

  Fly   101 --ADHDFTLEEVLSEIAFFRGESYHTVHECSGEEVTASCFYSNFSYYAELVRSSCVDSISNCEWN 163
              ||:|               |:|......:...|..:...|:.:....|.  :..|.|.:|.:.
 Worm   124 LYADND---------------ETYDLDSRAADALVLEANLISDTAKVPALY--TYADLIQDCSFA 171

  Fly   164 NKPFECCKYFHRMETELGICYAINSMQAGKPKMPKLNMYSNRGSGPGALKMELHTEATVFILGTE 228
            ..|.....:...::...|.||:.|       :...||...:|......||:.|....|.....|:
 Worm   172 GIPCSESDFTKFIDPVYGACYSFN-------EDASLNYSVSREGIQFGLKLMLTVTQTKTNGNTD 229

  Fly   229 EVPTL-------------VTPKTDFLVVGPYISFVRYISKRDIENDEEIRQTSVHQRNCRFADEN 280
            .:||.             .:|..|...:.   :.|.|.|...:...:.:|....: ..|...:.:
 Worm   230 SLPTTKLAGARIGVNSRGSSPGLDSNGID---AGVGYESAVSVSLTQNVRAKKPY-GTCVDREPD 290

  Fly   281 ILDVHK--FYSYSACTVQCRKDRQMELCNCSS-HLSPNSPDWQLCN--MEGLECLNRNYEDLSVI 340
            ..|.:|  .|:...|...|::...:..|.|:: .|:..|.| ..|.  ...|:||          
 Worm   291 SSDYYKDFIYTLETCFNGCKQRDTIAKCQCANPRLALGSTD-TACQPIKADLDCL---------- 344

  Fly   341 IAKWSKLRGRKG---------LVCDCLPSCTE------VDI-----TTVYDSKENMAGSQNAISR 385
                ..|:|.:.         :.|:|.|.|.|      |.:     |:.|.:..:.||..:..|.
 Worm   345 ----QTLKGNQTSSTPNIDLLVECNCNPPCDESTYTPTVSLAQFPSTSYYVATSSTAGVGSCSST 405

  Fly   386 --------------------IEVGLIELPTERYKRNLVRGKLDLVVSIGGTTGLFVGASLLSFVE 430
                                |:|.|..|..|.|.........:::..:||..||::|.|::|.||
 Worm   406 NSKFSSKSDCQKWYNNNGMIIQVFLETLSYELYTETAGYTVSNVINDLGGQAGLWLGLSVISVVE 470

  Fly   431 I 431
            :
 Worm   471 M 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 99/514 (19%)
asic-2NP_492099.1 deg-1 12..474 CDD:273309 99/515 (19%)
ASC 13..471 CDD:279230 98/512 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7217
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.770

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