DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk13 and del-4

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:501 Identity:104/501 - (20%)
Similarity:178/501 - (35%) Gaps:132/501 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 STLHGARFIVDKDASWIERIFWVICLVAS-----WYASWLLIKASLSAFENNAISFVV--ESSFR 71
            ::.||...|...:|.|: |.||::.:|.|     |....||         .|.:||.|  |::.:
 Worm    19 TSTHGVPHIGMANARWL-RAFWILVVVVSIALFIWQFITLL---------TNYLSFSVNTETTLQ 73

  Fly    72 DWNTNFPAIIVC--------ESKNMDRIQEVAEQLWGADH---DFTLEEVLSEIAFFRGESYHTV 125
            .....||.:.:|        |:|::|.........:.:|.   .|.|...|:             
 Worm    74 FAERTFPTVTICHLNPWKLSETKSVDPDMSALIDAYNSDSSSAQFGLPASLT------------- 125

  Fly   126 HECSGEEVTAS---CFYS---NFSYY--AELVRSSCVDSISNCEWNNKPFECCKYFHRMETELGI 182
               :..:..||   ..||   |...|  |..:..|..|.:.:|.:|.|......:........|.
 Worm   126 ---ADRQQQASKWTLMYSERLNEKQYNDAADIAYSYDDMVVSCTYNAKTCNITDFNDFYNPSYGN 187

  Fly   183 CYAINSMQAGKPKMPKLNMYSNRGSGP-GALKMELHTEATVFILGTEEVPTLV-------TPKTD 239
            |...|:.          .|||:..:|| ..|:|.:.|:...::..||....::       .|..|
 Worm   188 CLQFNTD----------GMYSSSRAGPLYGLRMVMRTDQDTYLPWTEASGVIIDIHMQDEIPYPD 242

  Fly   240 ----FLVVGPYISF-VRYISKRDIENDEEIRQTSVHQRNCRFADENILDVHKFYSYSACTVQCRK 299
                |...|...|. |.|:....:........|....:...:...        |:..||...|.:
 Worm   243 VFGYFAPPGTASSLGVSYVQTTRLSKPYGSCTTKTKLKTTHYTGT--------YTVEACFRSCMQ 299

  Fly   300 DRQMELCNC----SSHLSPNSPDWQLCNMEGLECL-NRNYEDL--SVIIAKWSKLRGRKGLVCDC 357
            ::.:..|.|    .||.| |:..:..|: .|::.| |.|..||  |....::..|..     |||
 Worm   300 EKIIASCGCYYPAYSHAS-NTTQYVSCD-NGVQTLSNLNCVDLINSADSTEFDVLTD-----CDC 357

  Fly   358 LPSCTEVD-----ITTVYDSKENM---------------AGSQNAIS--RIEVGLIELPTERYKR 400
            ...| |:|     ::|.....::.               |..::.:.  :....|||:..||...
 Worm   358 PQPC-EIDSYGVTVSTAQWPSDSYVPTECNPGGPSGPWDASGESCLDWYKANTILIEIYYERMNF 421

  Fly   401 NLVRGK-----LDLVVSIGGTTGLFVGASLLSFVE-------IFYY 434
            .::...     ::.:..:||..|||:|.|::|.:|       :|:|
 Worm   422 QVLTESPAYTFVNFISDVGGQVGLFLGMSIISAIEYLVLIFLVFFY 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 103/499 (21%)
del-4NP_492230.2 ASC 8..466 CDD:295594 102/498 (20%)
deg-1 14..460 CDD:273309 102/492 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7217
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3633
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.800

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