DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and acd-1

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_491295.2 Gene:acd-1 / 182852 WormBaseID:WBGene00016064 Length:635 Species:Caenorhabditis elegans


Alignment Length:538 Identity:112/538 - (20%)
Similarity:187/538 - (34%) Gaps:158/538 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RVIEEYLKNSTLHGARFIVDKDASWIERIFWVICLVASW---------YASWLLIKASLSAFENN 60
            |..:.:.:.:|:||.:.|. :...| ..:||:|.:..|.         .||..|.|.::|     
 Worm    78 RETQHFCETTTMHGPKRIF-QGKRW-ATLFWLIMVSCSLGLLITQVFILASEYLSKPTVS----- 135

  Fly    61 AISFVVESSFRDWNTNFPAIIVCESKNMDRIQ--------------------------EVAEQLW 99
            .:||::.....|    ||.|.:|   |::.|:                          |:...:.
 Worm   136 DVSFLINEDGMD----FPLITIC---NLNPIRKTYVNEINKTGEVSPPMINYMMKWFTEIPTLIG 193

  Fly   100 GADHDFTLEEVLSEIAFFRGESYHTVHECSGEEVTASCFYSNFSYYAELVRSSCVDSISNCEWNN 164
            |||.. ||.|...|:..:.....:         .|...|:.|..:       ||.|....|.:..
 Worm   194 GADRP-TLHEGNEELKLYMKNHLN---------FTVDSFFMNSGF-------SCPDIFKLCSFQG 241

  Fly   165 KPFECCKYFHRMETELGICYAINSMQAGKPKMPKLNMYSNRGSGPG-----ALKMELHTEA---- 220
            :.|:||.....:.|.||.|:.::...:.|..|       ::.:.||     |:.::.|.|.    
 Worm   242 EIFDCCTLSTEVLTPLGKCFTLDLSSSTKASM-------HKQTEPGIQAGLAITLDAHLEEQFDG 299

  Fly   221 ----------------TVFILGTEEVPTL------VTPKTDFLVVGPYISFVRYISKRDIENDEE 263
                            ..|:.....:|.|      |:|.|   |....||..||:          
 Worm   300 SNGMDALFTNSFVNGFRYFVHPPNTIPHLSSDEFTVSPNT---VAFSAISSDRYV---------- 351

  Fly   264 IRQTSVHQ-RNCRFADENILD-VHKFYSYSA--CTVQCRKDRQMELCNCSSHLSPNSPDWQLCN- 323
              ....|| .||   .||..| :....|||:  |...|:....||.|.|:..|.....:.:.|. 
 Worm   352 --LLPTHQWGNC---TENFPDGIQSNLSYSSGNCLSLCKAKFYMENCGCTPALYNIENNLKECTP 411

  Fly   324 MEGLECLNRNYEDLSVIIAKWSKLRGRKGLVCDCLPSCTEVDITTVYDSKENMAGSQNA------ 382
            .|...||:.       |:||.:|..|:.........:|.:...:.||.: .|..|||.:      
 Worm   412 YETTTCLDN-------ILAKPNKETGKIEFQTPNCKACAQQCNSLVYRA-YNSYGSQFSAGAFHY 468

  Fly   383 ----------------ISRIEVGLIELPTERYKRNLVRGKLDLVVSIGGTTGLFVGASLLSFVEI 431
                            ...|.:...::....|.:........|:..|||..|:|:|.|:::..||
 Worm   469 LKSINPEWTDGHMRANFQMINIFYRDMSYTEYNQVQDASVTQLLSDIGGNMGMFLGMSVITITEI 533

  Fly   432 FYYITIRPYTTYINEKRR 449
            ..:.: :.:....::|||
 Worm   534 CLFFS-KMFWLGFSKKRR 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 108/516 (21%)
acd-1NP_491295.2 ASC 83..536 CDD:279230 108/516 (21%)
deg-1 83..536 CDD:273309 108/516 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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