DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and delm-2

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_491296.1 Gene:delm-2 / 182851 WormBaseID:WBGene00016063 Length:608 Species:Caenorhabditis elegans


Alignment Length:538 Identity:104/538 - (19%)
Similarity:192/538 - (35%) Gaps:136/538 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RVIEEYLKNSTLHGARFIVDKDASWIERIFWVI-------------CLVASWYASWLLIKASLSA 56
            |..:.:.:.:|:||.:.|. :...| ..:||:|             |::||.|.|..::      
 Worm    63 RETQHFCETTTMHGPKRIF-QGKRW-ATLFWLIMVCTSIGLLITQVCILASNYLSKPVV------ 119

  Fly    57 FENNAISFVVESSFRDWNTNFPAIIVCE--------SKNMDRIQEVAEQLWG-ADHDFTLEEVLS 112
               :.:||::...    ...||.|.:|.        ...|::..:::..:.. ..|.||      
 Worm   120 ---SDVSFLINEE----GIQFPQITICNFTPIRKTFVNEMNKTGQISPNMINYIMHWFT------ 171

  Fly   113 EIAFFRGES-YHTVHECSGE---------EVTASCFYSNFSYYAELVRSSCVDSISNCEWNNKPF 167
            |:....|.| :..:||.:.:         ..|...|:.:..:       ||.|....|.:..:.|
 Worm   172 EVPILIGSSNWQLLHEGNKDLQEYQKNNPNFTVQGFFIDAGF-------SCSDIFKLCSFQGETF 229

  Fly   168 ECCKYFHRMETELGICYAINSMQAGKPKMPKLNMYSNRGSGPG-----ALKMELHTE-------- 219
            :||.....:.|.||.||.::.:.:.||.|       ::.:.||     |:.::.|.|        
 Worm   230 DCCSISTPVLTPLGKCYTLDLLSSTKPSM-------HKQTEPGIQAGLAITLDAHLEEQFDGSNG 287

  Fly   220 -----ATVFILGTE-------EVPTLVTPKTDFLVVGPYISFVRYISKRDIENDEEIRQTSVHQR 272
                 ...|:.|.:       .:|.|  ...:|.|....:::....|:|     .|:..|: ...
 Worm   288 MDALFTNSFVNGFQYFVHPPNTIPHL--SSDEFTVTPNSVAYTAISSER-----FELLPTN-KWG 344

  Fly   273 NCRFADENILDVHKFYSYSACTVQCRKDRQMELCNCSSHLSPNSPDWQLCN-MEGLECLNRNYED 336
            ||.....:.:.....|....|...|:....||.|.|:..:..|..:.:.|. .|.|.|:|.:...
 Worm   345 NCTEHYPSGIKSDLPYLTGNCVSLCKAKFFMENCGCTPAVYNNERNLKECTPFETLACVNNHNGS 409

  Fly   337 LSVIIAKWSKLRGRKGLVCDCLPSCTEVDITTVYDSKEN------------------MAGSQNAI 383
            .:..    .||..:......|...|..: |...::|:.|                  ||..:...
 Worm   410 NNAT----GKLEFKLPRCAQCAQQCNNL-IYRAFNSQGNQFSARAFEWFRTNNSNWTMAHIKTNF 469

  Fly   384 SRIEVGLIELPTERYKRNLVRGKLDLVVSIGGTTGLFVGASLLSFVEIFYYIT------------ 436
            ..|.:...::....|.:.......||:.:|||..|:|:|.||::..||..|.:            
 Worm   470 QIIHIFYQDMSNTEYNQVQDASISDLLSNIGGNMGMFLGMSLITITEICLYFSKIIWLGISKKRR 534

  Fly   437 IRPYTTYINEKRRLKRLI 454
            ...|:..::||...|.::
 Worm   535 EYMYSKRVHEKTHKKEIV 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 98/499 (20%)
delm-2NP_491296.1 ASC 68..520 CDD:279230 98/499 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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