DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and mec-4

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_510712.2 Gene:mec-4 / 181728 WormBaseID:WBGene00003168 Length:768 Species:Caenorhabditis elegans


Alignment Length:342 Identity:63/342 - (18%)
Similarity:116/342 - (33%) Gaps:59/342 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 ISNCEWNNKPFEC-CKYFHRMETELGICYAINSMQAGKPKMPKLNMYSNRGSGPGALKMELHTEA 220
            :..|.:|.|..:. ..:...::...|.|:..|..:.       :|:.|.|......|:|.::..|
 Worm   447 VHKCSFNGKACDIEADFLTHIDPAFGSCFTFNHNRT-------VNLTSIRAGPMYGLRMLVYVNA 504

  Fly   221 TVFILGTEEVPTLVT--PKTDFLVVGPYISFVRYISKRDIENDEEIRQTSVHQRNCRFAD----- 278
            :.::..||.....:|  .|.||    |:.....|.:.....:...:|...:.:....:.|     
 Worm   505 SDYMPTTEATGVRLTIHDKEDF----PFPDTFGYSAPTGYVSSFGLRLRKMSRLPAPYGDCVPDG 565

  Fly   279 --ENILDVHKFYSYSACTVQCRKDRQMELCNCSSHLSPNSPDWQLCNME---GLECLNRNYEDLS 338
              .:.:..:..||...|...|.:...::.|.|.....|...:.:.|:..   ..:||:....||.
 Worm   566 KTSDYIYSNYEYSVEGCYRSCFQQLVLKECRCGDPRFPVPENARHCDAADPIARKCLDARMNDLG 630

  Fly   339 VIIAKWSKLRGRKGLVCDCLPSCTEVDITTVYD-------SKENMAGSQNAI------------S 384
            .:...:.         |.|...|.:...:..|.       |.:...||.|..            :
 Worm   631 GLHGSFR---------CRCQQPCRQSIYSVTYSPAKWPSLSLQIQLGSCNGTAVECNKHYKENGA 686

  Fly   385 RIEVGLIELPTERYKRNLVRGKLDLVVSIGGTTGLFVGASLLS-------FVEIFYYITIRPYTT 442
            .:||...:|..|....:...|.::|:...||..||:.|.|.|:       |:|..|......|:.
 Worm   687 MVEVFYEQLNFEMLTESEAYGFVNLLADFGGQLGLWCGISFLTCCEFVFLFLETAYMSAEHNYSL 751

  Fly   443 YINEKRRLKRLIIPKRF 459
            |..:|....:.|....|
 Worm   752 YKKKKAEKAKKIASGSF 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 57/315 (18%)
mec-4NP_510712.2 deg-1 86..736 CDD:273309 55/308 (18%)
ASC 87..>172 CDD:279230
ASC <428..739 CDD:295594 56/311 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.