DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and del-1

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001355359.1 Gene:del-1 / 181534 WormBaseID:WBGene00000952 Length:694 Species:Caenorhabditis elegans


Alignment Length:620 Identity:117/620 - (18%)
Similarity:194/620 - (31%) Gaps:228/620 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IEEYLKNSTLHGARFIVDKDASWIERIFWV----ICLVASWYASWLLIKASLSAFENNA-ISFVV 66
            :.::.:.:|.||...|......|: |..||    :|:....| |:..:|......|... :..|.
 Worm    73 VRDFCEQTTFHGVNMIFTTSLYWV-RFLWVVVSLVCICLCMY-SFSHVKDKYDRKEKIVNVELVF 135

  Fly    67 ESSFRDWNTNFPAIIVCE--------SKNMDRIQEVAEQLWGA---DHDFTLEEV-------LSE 113
            ||:      .||||.||.        ::::..|.|..:....|   .:|.|::|:       |::
 Worm   136 ESA------PFPAITVCNLNPFKNHLARSVPEISETLDAFHQAVVYSNDATMDELSGRGRRSLND 194

  Fly   114 IAFFRGESYHTVH----------ECSGE-------EVTASCFY---------------------- 139
            ...|:...|..|:          ||..:       |....|.|                      
 Worm   195 GPSFKYLQYEPVYSDCSCVPGRQECIAQTSAPRTLENACICNYDRHDGSAWPCYSAQTWEKSICP 259

  Fly   140 ----------------SNFSYYAELVRSSCV---------------------------------- 154
                            .|...|.:|....||                                  
 Worm   260 ECNDIGFCNVPNTTGSGNIPCYCQLEMGYCVFQPESRVRRIWEFQGNKIPEKGSPLRKEYMEQLT 324

  Fly   155 -----------------------------------------DSISNCEWNNKPFEC---CKYFHR 175
                                                     :.|..|.:|.:  :|   .::...
 Worm   325 QLGYGNMTDQVAITTQAKEKMILKMSGLHPQRRAALGYGKSELIKMCSFNGQ--QCNIDTEFKLH 387

  Fly   176 METELGICYAINSMQAGKPKMPKLNMYSNRGSGPGALKMELH---------TEAT---VFILGTE 228
            ::...|.||..|:       .|:..:.|:|......|::.:.         ||||   :.|.|.|
 Worm   388 IDPSFGNCYTFNA-------NPEKKLASSRAGPSYGLRLMMFVNSSDYLPTTEATGVRIAIHGKE 445

  Fly   229 EVPTLVTPKTDF---LVVGPYISFVRYISKRDIENDEEIRQTSVHQRNCRFADE-NILDVHKFYS 289
            |.|   .|.| |   ...|...||  .||.|:      |.:......||...|. ....::|.|.
 Worm   446 ECP---FPDT-FGYSAPTGVISSF--GISLRN------INRLPQPYGNCLQKDNPQSRSIYKGYK 498

  Fly   290 Y--SACTVQCRKDRQMELCNCSSHLSPNSP-DWQLCNMEGLECLNRNYEDLSVIIAKWSKLRGRK 351
            |  ..|...|.:.|.:..|.|:   .|..| .|:    ....|.:.|...|:.:..:.:||..::
 Worm   499 YEPEGCFRSCYQYRIIAKCGCA---DPRYPKPWK----RSAWCDSTNTTTLNCLTTEGAKLSTKE 556

  Fly   352 GLV-CDCLPSCTEVDITTVYD-----------SKENMAGSQNAISRIEVGLIELPTERYKRNLVR 404
            ... |.|:..|.:...||.|.           |.:|.:...|:..|....:||:..|:....::|
 Worm   557 NQKHCKCIQPCQQDQYTTTYSAAKWPSGSIQTSCDNHSKDCNSYLREHAAMIEIYYEQMSYEILR 621

  Fly   405 GK-----LDLVVSIGGTTGLFVGASLLSFVEIFYY 434
            ..     .:|:..:||..|||:|||::|.:|..::
 Worm   622 ESESYSWFNLMADMGGQAGLFLGASIMSVIEFLFF 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 117/615 (19%)
del-1NP_001355359.1 deg-1 75..656 CDD:273309 117/616 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3633
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.