DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and del-10

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_495302.3 Gene:del-10 / 174069 WormBaseID:WBGene00020897 Length:1069 Species:Caenorhabditis elegans


Alignment Length:480 Identity:96/480 - (20%)
Similarity:176/480 - (36%) Gaps:138/480 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ASWIERIFWVICLVASWYASWLLIK--ASLSAFENNAISFVVESSFRDWNTNFPAIIVCESKNM- 88
            ||.:.|..|  |::...:...:|::  :.:..:.:..::..:|:.:.. ..:||.:.:|.:... 
 Worm    89 ASPVTRGLW--CMIIIAFVILVLVQCYSQIKLYISEPVATNIEAEYPS-KISFPTVAICNNNQFR 150

  Fly    89 -----------DRIQEVAEQLWGADHDFTLEEVLSEIAFFRGESYHTVHECSGEEVTASCFYSNF 142
                       .|.:.::..|....||  :|.|           :.||...|. ::.|..|..:.
 Worm   151 LTYLTGGRIMNRRSKSISGSLLSTGHD--VESV-----------FDTVLRKSW-DMDAVKFLRSA 201

  Fly   143 SYYAELVRSSCVDSISNCEWNNKPFECCKY--FHRMETELGICYAINSMQAGKPKMPKLNMYSNR 205
            :::...:       |..|.|.|.  ..||.  |..:.|..|:|:|||:    .|..|    |...
 Worm   202 AHWKSRM-------ILGCTWPNG--TSCKLSDFKAVWTTTGLCWAINT----DPHNP----YEVT 249

  Fly   206 GSGPG-ALKMELHTEA-------------------TVFILGTEEVPTL----VTPKTDFLVVGPY 246
            |||.| .|::.|:.|:                   .:.|....::|..    |...:.:.:..|:
 Worm   250 GSGEGHGLRLLLNVESYERVDACTKHFRTKTLPGLKILIYNQTDIPDSSMNGVNVPSGYSMDIPF 314

  Fly   247 -------ISFVRYISKRDIENDEEIRQTSVHQRNCRFADENILDVHKFYSYSACTVQCRKDRQME 304
                   ::.|..|.    ||||:| :.|....|    .|||         ..||::........
 Worm   315 KMQHRSKLTGVHCIE----ENDEQI-EASTDFNN----PENI---------RTCTLRRYMTEVEN 361

  Fly   305 LCNCSSH--LSPNSPDWQL--CNMEG-LECLNRNYEDLSVIIAKWSKLRGRKGLVCDCLPSCTEV 364
            .|:|:..  .:.||.|.::  ||::. ..|..:..:          ::| .:|....|||.|..:
 Worm   362 SCHCTLRRAYTSNSTDVKMKACNVDQYFGCAQKAMQ----------RIR-EEGTASTCLPPCKSI 415

  Fly   365 DITTVYDSKENMAGSQNAISRIEVGLIELPTERYKRNLVRGKLDLVVSIGGTTGLFVGASLLSFV 429
            |.|...|....   .||.:.    .|||...|..:.::.:.:||..||....:    |....|..
 Worm   416 DYTAWQDMNRL---PQNLMP----ALIEEQEEDDEDDVEQEELDENVSFSTVS----GGETFSCE 469

  Fly   430 EIFYYITIRPYTTYINEKR--RLKR 452
            :          :.|:::|:  |:||
 Worm   470 D----------SAYLDDKQVMRIKR 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 91/458 (20%)
del-10NP_495302.3 ASC 83..>419 CDD:279230 77/392 (20%)
ASC <789..849 CDD:279230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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