DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and scnn1d

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_031762206.1 Gene:scnn1d / 100496702 XenbaseID:XB-GENE-991876 Length:604 Species:Xenopus tropicalis


Alignment Length:581 Identity:109/581 - (18%)
Similarity:196/581 - (33%) Gaps:179/581 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FSRVIEEYLKNSTLHGARFIVDKDASWIERIFW-VICLVASWYASWLL--IKASLSAFENNAISF 64
            |..:::.:..|:|:||...:.....:.::..|| |:..||.....|..  :.....|:..|.|  
 Frog    19 FEDMLKFFCDNTTIHGTVRLNCSRENKMKTTFWLVLYFVAFAMMYWQFGQLTDQYWAYPTNTI-- 81

  Fly    65 VVESSFRDWNTNFPAIIVC-------ESKNM--DRIQEVAEQ----LWGADHD--------FTLE 108
               ...:.....|||:.:|       :..||  :::.::|::    |:..:::        ..|:
 Frog    82 ---IGLQSKGKIFPAVTICNLNPYRFDQVNMYINQLDQLAKETLYLLYEYEYEVPESPQQVVDLQ 143

  Fly   109 EVLSEIA------FFRGES--YHTVHE-------------------CSGEEVTASCFY------- 139
            ::|:.:.      |...:|  ...:.|                   |:.   :..|:|       
 Frog   144 DLLNNVTGQFNGNFILDQSIVLQKLQENGSGPALPGQKKFKVGFKLCNS---SGDCYYKWFWSGF 205

  Fly   140 ---------------SNFSYYAELVRSSCVDSISNCEWNNKPFECCKYFHRMETELGICYAINSM 189
                           ||......:..:...|.|..|.:|..|.:..:|.|......|.|:.||: 
 Frog   206 DAVHEWYKFHYINIMSNIPAVLNIANNFSRDYILTCHFNEMPCDEREYVHFHHPIYGNCFTINN- 269

  Fly   190 QAGKPKMPKLNMYSNRGSGPG-------ALKMELHTE---------ATVFILGTEEVPTL----- 233
                 ...:.:.||:|   ||       .:|.:||..         |.:.|....:.|.:     
 Frog   270 -----HWKENSWYSSR---PGKQYGLSIVVKTDLHDNMPLLSQAAGARIMIHNPNQPPLVEHQGF 326

  Fly   234 -VTPKTDFLVVGPYISFVRYISKRDIENDEEIRQTSVHQRNCRFADENILDVHKFYSYS----AC 293
             :.|.|:              :...::.:|.||....:.: |. :|.:.|.:...|:.|    ||
 Frog   327 DIRPGTE--------------NSISVKQEEAIRLGGKYSQ-CT-SDGSDLGIKILYNTSYTMQAC 375

  Fly   294 TVQCRKDRQMELCNCSSHLSP-----------NSPDWQLCNMEGLE----------------CLN 331
            ...|.:.:.:|:|.|..:..|           ..|||..|..:..|                |..
 Frog   376 LNSCFQYKMIEVCGCGYYFYPLPPGMEYCNYNKHPDWGYCFYQLYEKMLDHTLICFTQCPKQCKQ 440

  Fly   332 RNYEDLSVIIAKW-SKLRGRKGLVCDCLPSCTEVDITTVYDSKENMAGSQNAISRIEVGLIELPT 395
            ..|. ||...||| |.:...|.|:.              ...:.|....::.||:|.|...||..
 Frog   441 TEYH-LSAGTAKWPSPVSKAKKLLS--------------LQERYNSTSKRSDISKINVYYEELSY 490

  Fly   396 ERYKRNLVRGKLDLVVSIGGTTGLFVGASLLSFVEIFYYI--TIRPYTTYINE--KRRLKR 452
            ...:.........|:.|:||....:.|:|:||..||...:  |:......|.:  |:|.||
 Frog   491 RSVEETPSVSVTMLLSSMGGLWSWWFGSSVLSVAEIAELVLDTVAMVIIVIYQWKKQRAKR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 102/550 (19%)
scnn1dXP_031762206.1 ENaC 18..583 CDD:273304 109/581 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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