DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk13 and scnn1g

DIOPT Version :9

Sequence 1:NP_001014495.1 Gene:ppk13 / 3346226 FlyBaseID:FBgn0053508 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_031749443.1 Gene:scnn1g / 100487822 XenbaseID:XB-GENE-980897 Length:672 Species:Xenopus tropicalis


Alignment Length:586 Identity:105/586 - (17%)
Similarity:190/586 - (32%) Gaps:203/586 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VIEEYLKNSTLHGARFIVDKDASWIERIFWVI---CLVA--SWYASWLL-----IKASLSAFENN 60
            :::.|..|:..||.|.||..... :.|..|::   |.||  .|..:.||     :.||::.....
 Frog    39 LMQWYCLNTNTHGCRRIVVSKGR-LRRWIWIVLTLCAVALIFWQCALLLMSYYSVSASITVTFQK 102

  Fly    61 AISFVVESSFRDWNTNFPAIIVCE------SKNMDRIQEV--------------AEQLWGADHDF 105
            .:              |||:.:|.      ||..||:..:              .|.|..:..|.
 Frog   103 LV--------------FPAVTICNLNPYSYSKIKDRLSALERETSQTLKNIYGFTEPLVRSKRDV 153

  Fly   106 TLEE-----VLSEIAFFRGESYH--------------------TVHECSGEEV------------ 133
            .::|     .:.:|..:|.||..                    .:|. ..|.|            
 Frog   154 EVDENSTDIFIKQIPLYRLESVQGNQLVVSDLKTKKRTRMSAKVIHR-DAESVQDPGNMVGFKLC 217

  Fly   134 ----TASCFYSNFS-------------YYAELVRSSCVDSIS-----------------NCEWNN 164
                ::.|....||             |...|.:.|..|.|:                 :|:..|
 Frog   218 DPNNSSDCTIFTFSSGVNAIQEWYRLHYTNVLAKISMEDKIAMGYKADELIVTCFFDGLSCDARN 282

  Fly   165 KPFECCKYFHRMETELGICYAINSMQAGKPKMPKLNMYSNRGSGPGALKMELH---TEATVFILG 226
                 ...||  ....|.||..||.:.|.      .:.|:.|.....||:.|:   .|...::..
 Frog   283 -----FTLFH--HPLYGNCYTFNSAERGN------LLVSSMGGAEYGLKVVLYIDEDEYNPYLST 334

  Fly   227 TEEVPTLVTPKTDFLVVGPYISFVRYISKRDIEND-EEIRQTSVHQR------------NCRF-- 276
            ......||..:.::    |:|        .|:..: |...:||:..:            :|..  
 Frog   335 AAGAKILVHDQDEY----PFI--------EDLGTELETATETSIGMQLTESTKLSDPYSDCTMDG 387

  Fly   277 ADENILDVH-KFYSYSACTVQCRKDRQMELCNCSSHLSP-----------NSPDWQLCN------ 323
            :|.::.::: |.|:...|...|.:...:..|.|:.:..|           ..|.|..|.      
 Frog   388 SDVSVENLYSKKYTLQICLNSCFQREMVRTCGCAHYDQPLPNGAKYCNYEEYPSWIYCYFKLYKQ 452

  Fly   324 --MEGLECLNRNYED-------LSVIIAKWSKLRGRKGLVCDCLPSCTEVDITTVYDSKENMAGS 379
              .|.|.|.:...|.       |:..:|||..|...:.::        .| ::.....|.|...:
 Frog   453 FVQEELGCQSACRESCSFKEWTLTRSLAKWPSLNSEQWML--------RV-LSWELGEKLNKNLT 508

  Fly   380 QNAISRIEVGLIELPTERYKRNLVRGKLDLVVSIGGTTGLFVGASL---LSFVEIF----YYITI 437
            :|.::.:.:...:|.:.....:.....:.|:.:.||..||::..|:   |..||:|    :::.:
 Frog   509 KNDLANLNIFYQDLNSRSISESPTYNIVTLLSNFGGQLGLWMSCSMICVLEIVEVFFIDSFWVVL 573

  Fly   438 R 438
            |
 Frog   574 R 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk13NP_001014495.1 ASC 10..434 CDD:279230 104/576 (18%)
scnn1gXP_031749443.1 ENaC 35..651 CDD:273304 105/586 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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