DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33510 and pkdc

DIOPT Version :10

Sequence 1:NP_001014493.2 Gene:CG33510 / 3346224 FlyBaseID:FBgn0053510 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_001335286.1 Gene:pkdc / 797003 ZFINID:ZDB-GENE-041111-115 Length:322 Species:Danio rerio


Alignment Length:328 Identity:57/328 - (17%)
Similarity:102/328 - (31%) Gaps:112/328 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 EKEIKLYDLLNELKKFSKHVWSAKC---------YFTRKDLFVMQNVEDMGYVALPPGTRFLNEN 157
            :::::.|.:  |...:..:..:..|         .|..:.|.|:   ||:.....|....::|:.
Zfish    71 QRKVRSYQV--ETYWYQNYTTNENCRVPLCLAAKSFGEEQLIVL---EDLDVAGFPVRKTYVNDA 130

  Fly   158 QMGPILKSLATLHASSIAYEKQQGKTIGVEFRKWLKEVSVDPEVEWYTTGLRAVLAVAAIHPDVL 222
            ::...|..:|..||..:                     .|.||..|          ....:..:.
Zfish   131 EIKACLSWIANFHALFL---------------------DVTPEGLW----------PIGTYWHLE 164

  Fly   223 DNPEAQEYIA-QELPRCLDKVYCMVNPSPVHRNVFVHRDAWNANVFYHKEKPHEERSILVDFQ-- 284
            ..||..|.:: |:|.....::..::|  .......||.||..||..:.|:   ..:...||||  
Zfish   165 TRPEELEAMSDQKLKAAAGEIDSILN--NCRFKTIVHGDAKLANFCFSKD---GLQVASVDFQYV 224

  Fly   285 --------LCRYSPPAMDFHLVTYLNLEPFSRKKMIGSLIETYYDALAEEFREMGVNPYQEQLSK 341
                    :..:....||         |....||..| |::.|:..|.:..        ::::..
Zfish   225 GGGCGMKDVIYFLGSCMD---------ERECEKKAPG-LLDYYFSELRKSL--------EKKVDF 271

  Fly   342 QEFEQSLNDFSLFGATYNCIAATVLRLPDNYLKNLKDERPEDFHRFCNVDRSADVLRLMKNHPEF 406
            .|.|:...:...|..|                         |||||        :|..|..|.:.
Zfish   272 AELEKEWRNMFAFAWT-------------------------DFHRF--------LLGWMPGHHKI 303

  Fly   407 ADY 409
            ..|
Zfish   304 NKY 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33510NP_001014493.2 CHK 134..329 CDD:214734 39/205 (19%)
pkdcXP_001335286.1 Protein Kinases, catalytic domain <96..267 CDD:473864 41/227 (18%)

Return to query results.
Submit another query.