DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-37Da and Clec4a1

DIOPT Version :9

Sequence 1:NP_001014489.1 Gene:lectin-37Da / 3346222 FlyBaseID:FBgn0053532 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001005890.1 Gene:Clec4a1 / 362430 RGDID:1359109 Length:243 Species:Rattus norvegicus


Alignment Length:140 Identity:30/140 - (21%)
Similarity:48/140 - (34%) Gaps:43/140 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YVFGQTKVNWYVAYENCRRLQSELVTFETAEEFDAIAAFLNARGDRSEHWTSGNDLGKTGTH-YW 114
            |...:...:|..:.|.|....:.|:...:.||.|.|...||.|.    |:..|  |..|..| .|
  Rat   124 YFTSRDSASWSDSEEKCSHRGAHLLVIHSQEEQDFITDTLNPRA----HYYVG--LSDTEGHGKW 182

  Fly   115 FSNAQLVTIKRWAPKQPDN-----------AGGREHCIHLGYI-----YGYSTEFQLNDRPCHNH 163
                      :|..:.|.|           :|.:..|:.|.|.     :|:|.      .||..:
  Rat   183 ----------QWVDQTPFNQNATSWHADEPSGNKGFCVVLSYHPNLKGWGWSV------APCDGY 231

  Fly   164 ASSLFKYICE 173
                .:.:|:
  Rat   232 ----HRLVCK 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-37DaNP_001014489.1 CLECT 49..173 CDD:153057 29/138 (21%)
Clec4a1NP_001005890.1 CLECT_DC-SIGN_like 112..238 CDD:153060 30/140 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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