DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-37Da and clec-34

DIOPT Version :9

Sequence 1:NP_001014489.1 Gene:lectin-37Da / 3346222 FlyBaseID:FBgn0053532 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_507234.1 Gene:clec-34 / 180116 WormBaseID:WBGene00012023 Length:363 Species:Caenorhabditis elegans


Alignment Length:181 Identity:43/181 - (23%)
Similarity:69/181 - (38%) Gaps:44/181 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 YTTHIQNG--NPYNLTVDMTPF------IKINESYYVFGQTKVNWYVAYENCRRLQSELVTFETA 80
            :|..:.|.  :|.:.|.:..|.      |..|......|.|.:|     ..|.||.::|.|.|.|
 Worm    69 FTESLSNSDTSPASTTTEPLPTSSTPGKIPPNNITCAVGFTYIN-----HKCWRLFTDLQTRENA 128

  Fly    81 ------------------EEFDAIAAF-LNARGDRSEHWTSGNDLGKTG-THYWFSNAQLVTI-K 124
                              :|.:|:..| |||..|..  ||....:|||. :..|...:...:: .
 Worm   129 DGACMRYGGSTLFSIRNEQENNAMLGFMLNAGVDNL--WTGLICVGKTTFSCTWDMESGTTSVYN 191

  Fly   125 RWAPKQPDNAGGREHCIHLGYIYGYSTEFQLNDRPCHNHASSLFKYICEAP 175
            .:|.:.|||..|  :|::  :|...:...|.....|:...|    ::||.|
 Worm   192 SFASESPDNTYG--NCVY--FIITGTQAGQWKSGLCNMTMS----FVCELP 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-37DaNP_001014489.1 CLECT 49..173 CDD:153057 33/144 (23%)
clec-34NP_507234.1 CLECT 104..232 CDD:214480 33/142 (23%)
CLECT 246..356 CDD:214480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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