DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-37Db and Clec10a

DIOPT Version :10

Sequence 1:NP_001014490.1 Gene:lectin-37Db / 3346221 FlyBaseID:FBgn0053533 Length:150 Species:Drosophila melanogaster
Sequence 2:XP_008766090.1 Gene:Clec10a / 64195 RGDID:621158 Length:307 Species:Rattus norvegicus


Alignment Length:119 Identity:28/119 - (23%)
Similarity:51/119 - (42%) Gaps:10/119 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 YYISLAKTNWFEASNHCRQNGGFLLNLESREELELLSPHLHPAYSYWLSINDLGERGVYVSEATG 100
            |:.|.:...|.||..:|:.....|:.:.|..|...|..|:....: |:.:.|......:| :.|.
  Rat   188 YWFSQSGKPWPEADKYCQLENSNLVAVNSLAEQNFLQTHMGSVVT-WIGLTDQNGPWRWV-DGTD 250

  Fly   101 LEAPFLNWSAGEPDNSSGY-----DRCVELWLSTTSFQMNDLPCYSSVAFICQL 149
            .|..|.:|:..:|||..|:     :.|...   |:..:.||..|.....::|::
  Rat   251 YEKGFTHWAPKQPDNWYGHGLGGGEDCAHF---TSDGRWNDDVCQRPYRWVCEM 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-37DbNP_001014490.1 CLECT 34..148 CDD:153057 27/116 (23%)
Clec10aXP_008766090.1 Lectin_N 5..166 CDD:461106
CLECT_DC-SIGN_like 176..301 CDD:153060 28/117 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.