DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-37Db and Selp

DIOPT Version :10

Sequence 1:NP_001014490.1 Gene:lectin-37Db / 3346221 FlyBaseID:FBgn0053533 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_037246.2 Gene:Selp / 25651 RGDID:3656 Length:768 Species:Rattus norvegicus


Alignment Length:143 Identity:38/143 - (26%)
Similarity:69/143 - (48%) Gaps:12/143 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVCWSALPLESSPLGNRYNLEIGEKQYYISLAKTNWFEASNHCRQNGGFLLNLESREELELLS-- 72
            ||..|||   .|.|.|:  .|:....|..|....:|..:...|:::...|:.::::.|:..|:  
  Rat    23 LVWLSAL---ISELVNQ--KEVAAWTYNYSTKAYSWNNSRAFCKRHFTDLVAIQNKNEIAHLNDV 82

  Fly    73 -PHLHPAYSYWLSINDLGERGVYVSEATGLEAPFLNWSAGEPDNSSGYDRCVELWLSTTSF--QM 134
             |::: :| ||:.|..:..:..:|.....|.|...||:..||:|......|||:::.:.|.  :.
  Rat    83 IPYVN-SY-YWIGIRKINNKWTWVGTNKTLTAEAENWADNEPNNKRNNQDCVEIYIKSNSAPGKW 145

  Fly   135 NDLPCYSSVAFIC 147
            ||.||:.....:|
  Rat   146 NDEPCFKRKRALC 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-37DbNP_001014490.1 CLECT 34..148 CDD:153057 29/119 (24%)
SelpNP_037246.2 CLECT_selectins_like 42..160 CDD:153062 29/119 (24%)
EGF_CA <168..195 CDD:238011
CCP 200..258 CDD:153056
PHA02927 276..505 CDD:222943
PHA02927 443..699 CDD:222943
Endocytosis signal. /evidence=ECO:0000305 756..759
Interaction with SNX17. /evidence=ECO:0000250 759..768
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.