DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33552 and RDUF2

DIOPT Version :10

Sequence 1:NP_001014488.1 Gene:CG33552 / 3346220 FlyBaseID:FBgn0053552 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001331469.1 Gene:RDUF2 / 836074 AraportID:AT5G59550 Length:512 Species:Arabidopsis thaliana


Alignment Length:77 Identity:21/77 - (27%)
Similarity:39/77 - (50%) Gaps:13/77 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 AAQDAIANQAENLSMKRKKIAE-----ENKCYICKWNYEVTGDHRPVSIKCGHLFGANCILHYLQ 123
            |::.||.      |:.|.:|::     |..|.:|...:|...:.|  .:.|.|||..:||:.:|.
plant   280 ASKSAIE------SLPRVEISDCHIGSEANCAVCTEIFETETEAR--EMPCKHLFHDDCIVPWLS 336

  Fly   124 RNKTCPICKSQM 135
            ...:||:|:.::
plant   337 IRNSCPVCRFEL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33552NP_001014488.1 RING_Ubox 85..144 CDD:473075 15/56 (27%)
RDUF2NP_001331469.1 zinc_ribbon_9 122..159 CDD:433910
RING-H2_RNF126-like 303..345 CDD:438329 13/43 (30%)
DUF1117 365..495 CDD:399509
Blue background indicates that the domain is not in the aligned region.

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