DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33552 and SDIR1

DIOPT Version :10

Sequence 1:NP_001014488.1 Gene:CG33552 / 3346220 FlyBaseID:FBgn0053552 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_191112.1 Gene:SDIR1 / 824718 AraportID:AT3G55530 Length:273 Species:Arabidopsis thaliana


Alignment Length:90 Identity:27/90 - (30%)
Similarity:44/90 - (48%) Gaps:6/90 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LQLDKEKNITKELRLRLAAQDAIANQAENL----SMKRKKIAEENKCYICKWNYEVTGDHRPVSI 107
            |.:.|.|.:..|....||.|.:.::.||.:    :..:|...:|..|.:|.  .:||......::
plant   165 LPVHKYKVLDPENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCL--EQVTVGEIVRTL 227

  Fly   108 KCGHLFGANCILHYLQRNKTCPICK 132
            .|.|.|.|.||..:|::..|||:||
plant   228 PCLHQFHAGCIDPWLRQQGTCPVCK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33552NP_001014488.1 RING_Ubox 85..144 CDD:473075 17/48 (35%)
SDIR1NP_191112.1 RING-H2_PA-TM-RING 210..252 CDD:438118 14/43 (33%)

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