DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33552 and AT2G03000

DIOPT Version :10

Sequence 1:NP_001014488.1 Gene:CG33552 / 3346220 FlyBaseID:FBgn0053552 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_178400.1 Gene:AT2G03000 / 814829 AraportID:AT2G03000 Length:535 Species:Arabidopsis thaliana


Alignment Length:141 Identity:28/141 - (19%)
Similarity:59/141 - (41%) Gaps:16/141 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ITKMTKKKLIVE---VIKQRKRNKE------KDEIIKDSFESKKRLIDLRLQLDKEKNITKELRL 61
            :||:::..::..   ||...:..||      ...:...|..:..|.||.::.|....:.|: ...
plant   390 VTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTR-TTA 453

  Fly    62 RLAAQDAIANQAENLSMKRKKIAEENKCYIC--KWNYEVTGDHRPVSIKCGHLFGANCILHYLQR 124
            ||...::.|.......:.|..:.|:.:|.||  :|    :.......:.|.|.:...|:..:|:.
plant   454 RLLTNESPATIRAVAMLPRVAMVEKGECVICFEEW----SKSDMETELPCKHKYHLECVEKWLKI 514

  Fly   125 NKTCPICKSQM 135
            :.:||.|:.::
plant   515 HTSCPQCRYKL 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33552NP_001014488.1 RING_Ubox 85..144 CDD:473075 12/53 (23%)
AT2G03000NP_178400.1 ROM1 85..>386 CDD:227709
zf-RING_2 480..522 CDD:433370 10/45 (22%)
Blue background indicates that the domain is not in the aligned region.

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