DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33552 and Pja1

DIOPT Version :10

Sequence 1:NP_001014488.1 Gene:CG33552 / 3346220 FlyBaseID:FBgn0053552 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001385653.1 Gene:Pja1 / 683077 RGDID:1591532 Length:623 Species:Rattus norvegicus


Alignment Length:150 Identity:32/150 - (21%)
Similarity:52/150 - (34%) Gaps:42/150 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NKEKDEIIKDSFESKKRLID------------------LRLQLDKEKNITKELRLRLAAQDAIAN 71
            |.|.|..:.:..|....|.|                  ....:..|:.:.:.:...||..:::|.
  Rat   476 NLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAV 540

  Fly    72 QAENLSMKRKK-----------------IAEENKCYICKWNYEVTGDHRPVSIKCGHLFGANCIL 119
            ..|..:....|                 :.:|..|.||...| |.|: ....:.|.|.|...|:.
  Rat   541 DVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEY-VKGE-VATELPCHHYFHKPCVS 603

  Fly   120 HYLQRNKTCPICKSQMIRCM 139
            .:||::.|||:|     |||
  Rat   604 IWLQKSGTCPVC-----RCM 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33552NP_001014488.1 RING_Ubox 85..144 CDD:473075 19/54 (35%)
Pja1NP_001385653.1 RING-H2_PJA1_2 574..619 CDD:438128 18/51 (35%)

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