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Protein Alignment CG33552 and Rnf4

DIOPT Version :9

Sequence 1:	NP_001014488.1	Gene:	CG33552 / 3346220	FlyBaseID:	FBgn0053552	Length:	157	Species:	Drosophila melanogaster
Sequence 2:	NP_062055.1	Gene:	Rnf4 / 29274	RGDID:	3583	Length:	194	Species:	Rattus norvegicus

Alignment Length:	141	Identity:	29/141 - (20%)
Similarity:	62/141 - (43%)	Gaps:	18/141 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 DITKMTKKKLIVE--------VIKQRKRNKEKDEIIKDSFESKKRLIDLRLQLDKEKNITKELRL 61
            |:|..:.:.::|:        ::::|:|.:.....::........:.....:|.|:|::......
  Rat    52 DLTCESLEPVVVDLTHNDSVVIVEERRRPRRNGRRLRQDHADSCVVSSDDEELSKDKDVYVTTHT 116

  Fly    62 RLAAQDAIANQAENLSMKRKKIAEENKCYICKWNY-EVTGDHR-PVSIKCGHLFGANCILHYLQR 124
            ..:.:|      |..:..|.  :....|.||...| |:..:.| .||.:|||:|.:.|:...|:.
  Rat   117 PRSTKD------EGTTGLRP--SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN 173

  Fly   125 NKTCPICKSQM 135
            ..|||.|:.::
  Rat   174 ANTCPTCRKKI 184

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.