DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33552 and Rfwd3

DIOPT Version :9

Sequence 1:NP_001014488.1 Gene:CG33552 / 3346220 FlyBaseID:FBgn0053552 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_666330.2 Gene:Rfwd3 / 234736 MGIID:2384584 Length:774 Species:Mus musculus


Alignment Length:126 Identity:32/126 - (25%)
Similarity:60/126 - (47%) Gaps:16/126 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EKDEIIKDSFESKKRLIDLRLQLDKEKNI--TKELRLRLAAQDAI---ANQAENLSMKRKKIAEE 86
            |.:|::..:.|.:..:        .|:.:  |.:....:...||:   :.|..|: :...:..|.
Mouse   230 EDEEVVVQAEEPEANI--------PEQGVIATDQEATSVTGDDAVPKESPQKPNM-LSAMEDEEG 285

  Fly    87 NKCYICKWNYEVTGDHRPVSIKCGHLFGANCILHYLQ-RNKTCPICKSQMIRCMDVRIIIA 146
            ..|.||...:...||||..:::||||||..||..:|: :.:.||.| ::..:..|:.:|.|
Mouse   286 ETCTICLEQWTNAGDHRISALRCGHLFGFRCISKWLKGQTRKCPQC-NKKAKHSDIVVIYA 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33552NP_001014488.1 zf-RING_2 87..132 CDD:290367 18/45 (40%)
Rfwd3NP_666330.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..126
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..281 9/59 (15%)
RING 287..334 CDD:238093 19/47 (40%)
WD40 451..>571 CDD:295369
WD40 <486..>626 CDD:225201
WD 1 493..535
WD40 repeat 501..537 CDD:293791
WD 2 536..568
WD40 repeat 542..582 CDD:293791
WD 3 583..628
WD40 repeat 590..644 CDD:293791
WD40 repeat 701..741 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836269
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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