DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33552 and rfwd3

DIOPT Version :9

Sequence 1:NP_001014488.1 Gene:CG33552 / 3346220 FlyBaseID:FBgn0053552 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_017948850.2 Gene:rfwd3 / 100492921 XenbaseID:XB-GENE-6041816 Length:752 Species:Xenopus tropicalis


Alignment Length:96 Identity:28/96 - (29%)
Similarity:45/96 - (46%) Gaps:5/96 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ITKELRLRLAAQDAIANQAENLSMKRKKIAEENK---CYICKWNYEVTGDHRPVSIKCGHLFGAN 116
            :.:.:.|.|..|.......:.||..:....||::   |.||...:...|.||..:::||||||..
 Frog   228 VPESVTLPLQTQTKQKTPVKQLSPVKTLPPEEDEGDTCAICFEPWTNAGQHRLSALRCGHLFGFT 292

  Fly   117 CILHYLQRNKT-CPICKSQMIRCMDVRIIIA 146
            ||..:|:.... ||.|..:..|. |:.::.|
 Frog   293 CIERWLKGGAAKCPQCNKKAKRA-DIVVLYA 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33552NP_001014488.1 zf-RING_2 87..132 CDD:290367 17/48 (35%)
rfwd3XP_017948850.2 mRING-C3HGC3_RFWD3 261..309 CDD:319364 17/47 (36%)
WD40 <473..572 CDD:421866
WD40 repeat 477..514 CDD:293791
WD40 repeat 520..558 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1451258at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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